Return to main results Retrieve Phyre Job Id

Job DescriptionP23830
Confidence98.52%DateWed Jan 25 15:20:43 GMT 2012
Rank9Aligned Residues140
% Identity14%Templated2o8ra3
SCOP infoPhospholipase D/nuclease Phospholipase D/nuclease Polyphosphate kinase C-terminal domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   245....250.........260.........270..... ....280.........290.........300.........310.........320...
Predicted Secondary structure 









.


















Query SS confidence 






























.















































Query Sequence  GLGKSSLLNKTIFHLMPCAEQKLTICTPYFN. LPAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYL
Query Conservation         
    
  
  
   
 
 



 .
   
  

  
  


 
 

  
   
                   
Alig confidence 






























.


























.....................
Template Conservation 

 

  
  

 


 

 
 


 



 
  
 

 


 

 


 








.....................
Template Sequence  PYYTYDYVVRLLXEAAISPDVSEIRLTQYRVAENSSIISALEAAAQSGKKVSVFVELKA. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTB
ST
TTS


S

TT



S.....................
Template Predicted Secondary structure 















.....................
Template SS confidence 















































































   348.350.........360.........370.........380.........390.........400......
 
   324.....330.........340.........350.........360... .. ....370.........380.........390....
Predicted Secondary structure 







....

.....











Query SS confidence 







































. . . .

. . . . .




























Query Sequence  YEINLRRFLSRLQYYVNTDQLVVRLWKDDDNTYHLKGMWV. . . . DD. . . . . KWMLITGNNLNPRAWRLDLENAILIHDPQ
Query Conservation 
                  

 
 

      



  

....

.....    


 
 
 

   
 
    
 
  
Alig confidence  ......

















.














....

.....


















..







Template Conservation  ......



 

  

 

  

.

  






  

 


  
 
  

 







  





..
  
 

 
Template Sequence  . . . . . . RFNLRLSERXRRSGIRIV. YSXPGLKVHAKTALILYHTPAGERPQGIALLSTGNFNETTARIYS. . DTTLXTAN
Template Known Secondary structure  ......


T
.

TT








SSS


SS
SS


SS


..

Template Predicted Secondary structure  ......





.



















..

Template SS confidence 















































































   407..410.........420.... .....430.........440.........450.........460......... 470.......
 
   395....400.........410....
Predicted Secondary structure 
Query SS confidence 



















Query Sequence  LELAPQREKELELIREHTTI
Query Conservation    
   
  
       
  
Alig confidence 



















Template Conservation    
  
   

  


    
Template Sequence  TDIVHDVYRLFRILDGDPEP
Template Known Secondary structure  TT



Template Predicted Secondary structure 





Template SS confidence 



















   482.......490.........500.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions