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Job DescriptionP23830
Confidence98.08%DateWed Jan 25 15:20:43 GMT 2012
Rank10Aligned Residues130
% Identity15%Templated1xdpa4
SCOP infoPhospholipase D/nuclease Phospholipase D/nuclease Polyphosphate kinase C-terminal domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   252.......260.........270.........280.........290.........300.........310.........320.........330.
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Query Sequence  LNKTIFHLMPCAEQKLTICTPYFNLPAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRRF
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Template Sequence  VDREIANAQQGLPSGITLKLNNLV. DKGLVDRLYAASSSGVPVNLLVRGMC. . . . SLIPNLEGIS. . . . . . . . . . . . . . .
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   518.520.........530.........540. ........550.........560....... ..570.......
 
   332.......340.........350.........360... ......370.........380.........390.........400........
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Query Sequence  LSRLQYYVNTDQLVVRLWKDDDNTYHLKGMWV. . . DDKWMLITGNNLNPRAWRLDLENAILIHDPQLELAPQREKELELI
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Template Sequence  . . . . . . . . . . DNIRAISI. VDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEVATPLLD. . PRLKQRVLDIIDIL
Template Known Secondary structure  ..........TT.
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   578.580..... ....590.........600.........610.........620.........630 .........640....
 
   409410....
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Query Sequence  REHTTI
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Template Sequence  FSDTVK
Template Known Secondary structure  T

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   645....650
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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