 |
Job Description | P23830 | Confidence | 95.76% | Date | Wed Jan 25 15:20:43 GMT 2012 |
Rank | 15 | Aligned Residues | 40 |
% Identity | 30% | Template | d1jy1a2 |
SCOP info | Phospholipase D/nuclease
| Phospholipase D/nuclease
| Tyrosyl-DNA phosphodiesterase TDP1
|
Resolution | 1.69 |
|
  |   |
351 | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 390 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | D | N | T | Y | H | L | K | G | M | W | V | D | D | K | . |
. |
. |
. |
. |
. |
W | M | L | I | T | G | N | N | L | N | P | R | A | W | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | D | L | E | N | A | I | L | I |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|   |   |
|
|
|
|   | . | . | . | . | . | . |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|
|   |
Template Sequence |   |
R | S | N | A | X | P | H | I | K | T | Y | X | R | P | S | P | D | F | S | K | I | A | W | F | L | V | T | S | A | N | L | S | K | A | A | W | G | A | L | E | K | N | G | T | Q | L | X | I | R | S | Y | E | L | G | V | L | F |
Template Known Secondary structure |   |
| T | T | S |
|
|
|
|  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  | S |
|
| B | S |  |  |  |  |
|  |  |  | T | T | T | T |  |  |  |  |
| S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
487 | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|