Job Description P23830 Confidence 38.19% Date Wed Jan 25 15:20:43 GMT 2012 Rank 22 Aligned Residues 72 % Identity 14% Template d1jy1a1 SCOP info Phospholipase D/nuclease Phospholipase D/nuclease Tyrosyl-DNA phosphodiesterase TDP1 Resolution 1.69

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		254	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		K	T	I	F	H	L	M	P	C	A	.	.	E	Q	K	L	T	I	C	T	P	Y	F	N	L	P	A	I	L	V	R	N	I	I	Q	L	L	R	E	G	K	K	V	E	I	I	V	G	D	K	T	A	N	D	F	Y	I	P	E	D	E	P	F	K	I	I	G	A	L	P	Y	L	Y	E	I	N	L	R	R	F
Query Conservation												.	.
Alig confidence												.	.											.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	W	L	V	K	Q	Y	P	P	E	F	R	K	K	P	I	L	L	V	H	G	D	.	.	.	K	R	E	A	K	A	H	L	H	A	Q	A	K	P	Y	E	N	I	S	L	C	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S		G	G	G	T	T	S									.	.	.													T	T		T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.				.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																						.													.	.	.
Query SS confidence																						.													.	.	.
Query Sequence		L	S	R	L	Q	Y	Y	V	N	T	D	Q	L	V	V	R	L	W	K	D	.	D	D	N	T	Y	H	L	K	G	M	W	V	.	.	.	D	D	K	W	M	L	I	T	G	N	N	L	N	P
Query Conservation																						.													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.													.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	D	I	A	F	G	T	H	H	T	K	X	X	L	L	L	Y	E	E	G	L	R	V	V	I	H	T	S	N	L	I	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T													S	S											B	S	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions