Return to main results Retrieve Phyre Job Id

Job DescriptionP23830
Confidence5.50%DateWed Jan 25 15:20:43 GMT 2012
Rank87Aligned Residues76
% Identity8%Templatec3js3C_
PDB info PDB header:lyaseChain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20 .........30.........40.........50.........60.........70.........80
Predicted Secondary structure 




.














Query SS confidence 


















.



























































Query Sequence  LSKFKRNKHQQHLAQLPKI. SQSVDDVDFFYAPADFRETLLEKIASAKQRICIVALYLEQDDGGKGILNALYEAKRQRPE
Query Conservation              
   
  .      
  
    
 
  
   
  

  
 
       
     
   
  



  
Alig confidence 


















.




....















































..
Template Conservation           
         
 



....          
   
      

 
 
 
  

    
          ..
Template Sequence  ISRDYYTTLNKEISNTGLVDLIDVE. . . . LFMGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQEL. . G
Template Known Secondary structure 

TS

S....GGG
TT
SS



T..T
Template Predicted Secondary structure 






....














..
Template SS confidence 















































































   93......100.........110....... ..120.........130.........140.........150.........160..... .
 
   81..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  LDV
Query Conservation 
 
Alig confidence 


Template Conservation 


Template Sequence  ADL
Template Known Secondary structure 
S
Template Predicted Secondary structure 

Template SS confidence 


   167..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions