Job Description P23830 Confidence 51.31% Date Wed Jan 25 15:20:43 GMT 2012 Rank 21 Aligned Residues 74 % Identity 16% Template c2f5tX_ PDB info PDB header:transcription Chain: X: PDB Molecule:archaeal transcriptional regulator trmb; PDBTitle: crystal structure of the sugar binding domain of the archaeal2 transcriptional regulator trmb Resolution 1.45 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	F	R	E	T	L	L	E	K	I	A	S	A	K	Q	R	I	C	I	V	A	L	Y	L	E	Q	D	D	G	G	K	G	I	L	N	A	L	Y	E	A	K	R	Q	R	P	E	L	D	V	R	V	L	V	D	W	H	R	A	Q	R	G	R	I	G	A	A	A	S	N	T	N	A	D	W	Y	C	R	M	A
Query Conservation
Alig confidence																								.	.	.	.																			.	.										.	.	.	.	.	.
Template Conservation																								.	.	.	.																			.	.										.	.	.	.	.	.
Template Sequence		D	E	A	I	E	M	F	R	E	S	L	Y	S	A	K	N	E	V	I	V	V	T	.	.	.	.	P	S	E	F	F	E	T	I	R	E	D	L	I	K	T	L	E	R	.	.	G	V	T	V	S	L	Y	I	D	.	.	.	.	.	.	K	I	P	D	L	S	E	F	K	G	K	G	N	F	F	V	R	Q	F
Template Known Secondary structure														T		S	S							.	.	.	.		G	G	G														T	.	.	T								S	.	.	.	.	.	.	S					G	G	G	T	T	S	S
Template Predicted Secondary structure																								.	.	.	.																			.	.										.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		114	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	N	P	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	K	L	N	H	L
Template Known Secondary structure		S				S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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