Job Description P23830 Confidence 99.94% Date Wed Jan 25 15:20:43 GMT 2012 Rank 4 Aligned Residues 280 % Identity 19% Template c1xdoB_ PDB info PDB header:transferase Chain: B: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of escherichia coli polyphosphate kinase Resolution 3.00 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		F	F	Y	A	P	A	D	F	R	E	T	L	L	E	K	I	A	S	A	K	Q	.	.	.	.	.	R	I	C	I	V	A	L	Y	L	E	Q	D	D	G	G	K	G	I	L	N	A	L	Y	E	A	K	R	Q	R	P	E	L	D	V	R	V	L	V	D	W	H	R	A	Q	R	G	R	I	G	A	A	A	S	N
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.														.	.	.													.	.
Template Conservation																																									.	.	.													.	.
Template Sequence		L	L	Y	Y	P	Y	H	T	F	E	H	V	L	E	L	L	R	Q	A	S	F	D	P	S	V	L	A	I	K	I	N	I	Y	R	V	A	K	D	S	.	.	.	R	I	I	D	S	M	I	H	A	A	H	N	.	.	G	K	K	V	T	V	V	V	E	L	Q	A	R	F	D	E	E	A	N	I	H	W	A	K
Template Known Secondary structure					T	T	T	B		T											T	T		T	T									S	S			S	S		.	.	.												T	.	.										S			S	S			G	G	G	S	S	T	T
Template Predicted Secondary structure																																									.	.	.													.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380				.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.									.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.
Query Sequence		T	N	A	D	W	Y	C	R	M	A	Q	E	N	P	G	V	D	V	P	V	Y	G	V	P	I	N	T	R	E	A	L	G	V	L	H	F	K	G	F	I	I	D	D	S	.	.	.	.	.	.	.	.	V	L	Y	S	G	A	S	L	N	D	V	Y	L	H	Q	H	D	K	Y	R	Y	D	R	Y	H	L	I	R
Query Conservation																																														.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Sequence		R	L	T	E	A	G	V	H	V	I	F	S	A	P	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	H	A	K	L	F	L	I	S	R	K	E	N	G	E	V	V	R	Y	A	H	I	G	T	G	N	F	N	E	K	T	A	R	L	.	.	.	.	Y	T	D	Y	S	L	L	T	A
Template Known Secondary structure							T								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B												T	T										S	S		S		T	T					.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.																	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.					.	.	470	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	K	M	S	D	I	M	F	E	W	V	T	Q	N	I	M	N	G	R	G	V	N	R	L	D	D	V	N	R	P	K	S	P	E	I	K	N	D	I	R	L	F	R	Q	E	L	R	D	A	A	Y	H	F	Q	G	D	A	D	N	D	Q	L	S	V	T	P	L	V	G	L	G	K	S	S	L	L	N	K	T
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		D	A	R	I	T	N	E	V	R	R	V	F	N	F	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	Y	R	P	V	T	F	D	Y	L	M	V	S	P	Q	N	S	.	.	.	R	R	L	L	Y	E	M
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S					S	S					T	T	S	T	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.																																					.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510				.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.											.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure												.	.	.																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	F	H	L	M	P	C	A	E	Q	.	.	.	K	L	T	I	C	T	P	Y	F	N	L	P	A	I	L	V	R	N	I	I	Q	L	L	R	E	G	K	K	V	E	I	I	.	.	.	.	.	.	.	.	.	.	V	G	D	K	T	A	N	D	F	Y	I	P	E	D	E	P	F	K	I	I	G	A	L	P	Y
Query Conservation												.	.	.																																	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																																	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	R	E	I	A	N	A	Q	Q	G	L	P	S	G	I	T	L	K	L	N	N	L	V	D	K	G	L	V	D	R	L	Y	A	A	S	S	S	G	V	P	V	N	L	L	V	R	G	M	C	S	L	I	P	N	L	E	G	I	S	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T										S		B															T	T								S	S		B				S			T	T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.				.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		L	Y	E	I	N	L	R	R	F	L	S	R	L	Q	Y	Y	V	N	T	D	Q	L	V	V	R	L	W	K	D	D	D	N	T	Y	H	L	K	G	M	W	V	.	.	.	D	D	K	W	M	L	I	T	G	N	N	L	N	P	R	A	W	R	L	D	L	E	N	A	I	L	I	H	D	P	Q	L	E	L	A	P
Query Conservation																																											.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.														.	.	.																															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																																															.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	A	I	S	I	.	V	D	R	Y	L	E	H	D	R	V	Y	I	F	E	N	G	G	D	K	K	V	Y	L	S	S	A	D	W	M	T	R	N	I	D	Y	R	I	E	V	A	T	P	L	L	D	P	.	.	R	L	K	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.			S	S												T	T	S							S			B	S						T	S	B								S		.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																																															.	.
Template SS confidence
																							580	.	.	.	.	.		.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.			.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	E	K	E	L	E	L	I	R	E	H	T	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	L	D	I	I	D	I	L	F	S	D	T	V	K
Template Known Secondary structure												T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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