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Job DescriptionP33136
Confidence100.00%DateThu Jan 5 11:51:14 GMT 2012
Rank1Aligned Residues485
% Identity98%Templatec1txkA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:glucans biosynthesis protein g; PDBTitle: crystal structure of escherichia coli opgg
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70.........80.........90.........100..
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Query Sequence  FSIDDVAKQAQSLAGKGYETPKSNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA
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Template Sequence  FSIDDVAKQAQSLAGKGYETPKSNLP. . . . SXKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGXYFDTPVKINEVTATA
Template Known Secondary structure 

TS









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TT

GGG
BTTTSS
S

BTTB
S
B
SS
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   23......30.........40........ .50.........60.........70.........80.........90........
 
   103......110.........120.........130.........140.........150.........160.........170.........180..
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Query Sequence  VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSG
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Template Sequence  VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSXLGASYFRVIGAGQVYGLSARGLAIDTALPSG
Template Known Secondary structure 



GGG
TTS


TTTSTT


SS
TT

STT

TT




S
STT
TT
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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   183......190.........200.........210.........220.........230.........240.........250.........260..
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Query Sequence  EEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQSKIYLRDKVGKLGVAPLTSMFLFGPNQPS
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Template Sequence  EEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVXPGRDTVVDVQSKIYLRDKVGKLGVAPLTSXFLFGPNQPS
Template Known Secondary structure 
B




TT


TT
SSSSS

S

BTTB

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   183......190.........200.........210.........220.........230.........240.........250.........260..
 
   263......270.........280.........290.........300.........310.........320.........330.........340..
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Query Sequence  PANNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGE
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Template Sequence  PANNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSFSXENPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGE
Template Known Secondary structure  SS

S
S
S


TTS




SS
S






GGGT

TTT
GGG

SS
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   263......270.........280.........290.........300.........310.........320.........330.........340..
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  WGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDEDKLHAPDNAWVQQTRRSTGDVKQSNLIRQPD
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Template Sequence  WGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEXNFKYTITFSRDEDKLHAPDNAWVQQTRRSTGDVKQSNLIRQPD
Template Known Secondary structure 




S
TTS

S



TT
S
GGGGS
TTSBS
TT


TT



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   343......350.........360.........370.........380.........390.........400.........410.........420..
 
   423......430.........440.........450.........460.........470.........480.........490.........500..
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Query Sequence  GTIAFVVDFTGAEMKKLPEDTPVTAQTSIGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKTTEMRAALVNADQTLSET
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Template Sequence  GTIAFVVDFTGAEXKKLPEDTPVTAQTSIGDNGEIVESTVRYNPVTKGWRLVXRVKVKDAKKTTEXRAALVNADQTLSET
Template Known Secondary structure  S
TTGGGS
TT



TTTTTTS
TTS

SSS
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   423......430.........440.........450.........460.........470.........480.........490.........500..
 
   503......510.
Predicted Secondary structure 



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Query Sequence  WSYQLPANE
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Template Conservation 
 
 
    
Template Sequence  WSYQLPANE
Template Known Secondary structure 
TTS
Template Predicted Secondary structure 
Template SS confidence 








   503......510.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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