Job Description P0A927 Confidence 3.18% Date Thu Jan 5 11:09:14 GMT 2012 Rank 89 Aligned Residues 147 % Identity 12% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	W	Y	F	A	N	N	Y	I	Y	D	M	G	R	N	K	D	G	R	Q	S	T	W	Y	M	G	L	G	T	D	I	D	T	G	L	P	M	S	L	S	M	N	V	Y	A	K	Y	Q	W	Q	N	Y	G	A	A	N	E	N	E	W	D	G	Y	R	F	K	I	K	Y	F	V	P	I	T	D	L	W	G	G
Query Conservation
Alig confidence																																					.	.	.																																					.	.	.
Template Conservation																																					.	.	.																																					.	.	.
Template Sequence		S	G	F	Y	V	Q	A	D	A	A	H	A	K	A	S	S	S	L	G	S	A	K	G	F	S	P	R	I	S	A	G	Y	R	I	N	.	.	.	D	L	R	F	A	V	D	Y	T	R	Y	K	N	Y	K	A	P	S	T	D	F	K	L	Y	S	I	G	A	S	A	I	Y	D	F	D	T	.	.	.	Q	S	P
Template Known Secondary structure																		S	S																	T	.	.	.	T													S	S			S	S																		.	.	.	S	S	S
Template Predicted Secondary structure																																					.	.	.																																					.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.
		202	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																																										.
Query SS confidence							.	.	.	.																																										.
Query Sequence		Q	L	S	Y	I	.	.	.	.	G	F	T	N	F	D	W	G	S	D	L	G	D	D	S	G	N	A	I	N	G	I	K	T	R	T	N	N	S	I	A	S	S	H	I	L	A	L	N	Y	D	.	H	W	H	Y	S	V	V	A	R	Y	W	H	D	G	G	Q	W	N	D	D	A	E	L	N	F	G	N	G	N
Query Conservation							.	.	.	.																																										.
Alig confidence							.	.	.	.															.	.	.	.	.	.	.	.																				.																							.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.
Template Sequence		V	K	P	Y	L	G	A	R	L	S	L	N	R	A	S	V	D	L	G	G	S	D	S	.	.	.	.	.	.	.	.	F	S	Q	T	S	I	G	L	G	V	L	T	G	V	S	Y	A	V	T	P	N	V	D	L	D	A	G	Y	R	Y	N	Y	I	G	K	V	N	T	V	K	N	V	.	.	.	.	.	.	.
Template Known Secondary structure																				T	T				.	.	.	.	.	.	.	.																				T	T																T	T					.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100									.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	V	R	S	T	G	W	G	G	Y	L	V	V	G	Y	N	F
Query Conservation
Alig confidence		.	.	.						.	.
Template Conservation		.	.	.						.	.
Template Sequence		.	.	.	R	S	G	E	L	.	.	S	A	G	V	R	V	K	F
Template Known Secondary structure		.	.	.						.	.
Template Predicted Secondary structure		.	.	.						.	.
Template SS confidence
					143	.	.	.	.			.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions