Job Description P0A927 Confidence 2.91% Date Thu Jan 5 11:09:14 GMT 2012 Rank 98 Aligned Residues 77 % Identity 18% Template d1oopa_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4) Resolution 3.00

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		175	.	.	.	.	180	.	.	.	.	.																.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																															.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																															.	.	.	.	.
Query Sequence		G	A	A	N	E	N	E	W	D	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	K	I	K	Y	F	V	P	I	T	D	L	W	G	G	.	Q	L	S	Y	I	G	F	T	N	F	D	W	G	S	D	L	G	D	D	S	G	N	A	I	N	G	I	K	T	R	.	.	.	.	.	T	N
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																															.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																															.	.	.	.	.
Template Conservation
Template Sequence		G	G	P	V	P	T	K	V	N	S	Y	S	W	Q	T	S	T	N	P	S	V	F	W	T	E	G	S	A	P	P	R	M	S	V	P	F	I	G	I	G	N	A	Y	S	M	F	Y	D	G	W	A	R	F	D	K	Q	G	T	Y	G	I	S	T	L	N	N	M	G	T	L	Y	M	R	H	V	N	D	G	G	P
Template Known Secondary structure		T	S				S	S	T	T		G	G	G	G		S	S	S							T	T	S												S	S	S	S			S				S	B	S	S	T	T	S		S		B	S	G	G	G	T											S	S				S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	I	A	S	S	H	I	L	A	L	N	Y	D	H	W	H	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	I	V	S	T	V	R	I	Y	F	K	P	K	H	V	K	T
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions