Job Description P0A927 Confidence 3.13% Date Thu Jan 5 11:09:14 GMT 2012 Rank 92 Aligned Residues 142 % Identity 13% Template c2iwvD_ PDB info PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation Resolution 2.3 Å

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		28	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure													.																																		.	.	.	.	.
Query SS confidence													.																																		.	.	.	.	.
Query Sequence		P	Q	Y	L	S	D	W	W	H	Q	S	.	V	N	V	V	G	S	Y	H	T	R	F	G	P	Q	I	R	N	D	T	Y	L	E	Y	E	A	F	A	K	K	D	W	F	D	.	.	.	.	.	F	Y	G	Y	A	D	A	P	V	F	F	G	G	N	S	D	A	K	G	I	W	N	H	G	S	P	L	F	M	E
Query Conservation													.																																		.	.	.	.	.
Alig confidence													.																																		.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.
Template Sequence		D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A	N	D	L	N	T	T	G	Y	A	D	T	R	V	E	T	E	T	G	L	Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y	Y	L	E	R	G	F	N	M	D	D	S	R	N	N	G	E	.	.	.	.	.	.	.	.	F	S	T
Template Known Secondary structure						S	S	S														S									S														S	S	S	B														S	S	T	T			T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.									.	.	190
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	P	R	F	S	I	D	K	L	T	N	T	D	L	S	F	G	P	F	K	E	W	Y	F	A	N	N	Y	I	Y	D	M	G	R	N	K	D	G	R	Q	S	T	W	Y	M	G	L	G	T	D	I	D	T	G	L	P	M	S	L	S	M	N	V	Y	A	K	Y	Q	W	Q	N	Y	G	A	A	N	E
Query Conservation
Alig confidence															.																															.
Template Conservation															.																															.
Template Sequence		Q	E	I	R	A	Y	L	P	L	T	L	G	N	.	H	S	V	T	P	Y	T	R	I	G	L	D	R	W	S	N	W	D	W	Q	D	D	I	E	R	E	G	H	D	F	.	N	R	V	G	L	F	Y	G	Y	D	F	Q	N	G	L	S	V	S	L	E	Y	A	F	E	W	Q	D	H	D	E	G	D	S
Template Known Secondary structure													T	T	.																	T	T	T	T	T			S							.												S	S	S															S	S	S
Template Predicted Secondary structure															.																															.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions