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Job DescriptionP25738
Confidence2.15%DateThu Jan 5 11:42:25 GMT 2012
Rank61Aligned Residues22
% Identity36%Templatec3o3xA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:gp41-5; PDBTitle: crystal structure of gp41-5, a single-chain 5-helix-bundle based on2 hiv gp41
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.... .....100.
Predicted Secondary structure 

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Query Sequence  YDEIEIRQEWQEENT. . LHEWDEG
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Template Sequence  HSLIEESQNQQEKNEQELLGGSGG
Template Known Secondary structure 
S
TTTT
Template Predicted Secondary structure 



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   139140.........150.........160..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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