Return to main results Retrieve Phyre Job Id

Job DescriptionP25738
Confidence4.72%DateThu Jan 5 11:42:25 GMT 2012
Rank26Aligned Residues28
% Identity32%Templatec3k6wA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:solute-binding protein ma_0280; PDBTitle: apo and ligand bound structures of moda from the archaeon2 methanosarcina acetivorans
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1.... ....10.........20........
Predicted Secondary structure 

..







Query SS confidence 




. .






















Query Sequence  MTMYA. . TLEEAIDAAREEFLADNPGIDAE
Query Conservation 




..






















Alig confidence 




..






















Template Conservation 


  

            

   
 
 
 
Template Sequence  LTVFHAGSLSVPFEELEAEFEAQHPGVDVQ
Template Known Secondary structure 
GGG
TT
Template Predicted Secondary structure 






Template SS confidence 





























   43......50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions