Job Description P25738 Confidence 4.96% Date Thu Jan 5 11:42:25 GMT 2012 Rank 25 Aligned Residues 54 % Identity 28% Template c3dclC_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:tm1086; PDBTitle: crystal structure of tm1086 Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		L	A	D	N	P	G	I	D	A	E	D	A	N	V	Q	Q	F	N	A	Q	K	Y	V	L	Q	D	G	D	I	M	W	Q	V	E	F	F	A	D	E	G	E	E	G	E	C	L	P	.	.	.	M	L	S	G	E	A	A	Q	S	V	F	D	G	D	Y	D
Query Conservation																																																	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.						.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.
Template Sequence		L	L	D	H	P	D	V	K	V	X	N	I	D	P	D	L	F	E	K	L	G	I	Q	E	K	N	G	K	I	H	V	P	V	.	.	.	.	.	.	.	.	.	V	A	K	I	P	A	H	X	X	G	S	G	I	G	A	S	S	S	A	S	T	D	Y	D
Template Known Secondary structure		B	T	T		T	T	S				S	B						T	T	S						T	T							.	.	.	.	.	.	.	.	.	S					G	G	G	B		T	T	T	T		S		T	T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.										.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions