 |
Job Description | P25738 | Confidence | 4.30% | Date | Thu Jan 5 11:42:25 GMT 2012 |
Rank | 29 | Aligned Residues | 42 |
% Identity | 19% | Template | c2ktvA_ |
PDB info |
PDB header:translation | Chain: A: PDB Molecule:eukaryotic peptide chain release factor subunit 1; |
PDBTitle: human erf1 c-domain, "open" conformer
|
Resolution | UNK |
|
  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | E | F | F | A | D | E | G | E | E | G | E | C | L | . |
P | M | L | S | G | E | A | A | Q | S | V | F | D | G | D | Y | D | E | I | E | I | R | Q | E | W | Q | E |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|   |   |   |
|   |
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | L | E | I | V | T | D | K | S | Q | E | G | S | Q | F | V | K | G | F | G | G | I | G | G | I | L | R | Y | R | V | D | F | Q | G | M | E | Y | Q | G | G | D | D | E |
Template Known Secondary structure |   |
 |  |  |  |  |
| T | T | S |  |  |  |  |  |  |  | T | T | T |
| S |  |  |  |  |  | S | S |
|
|
|
|
|
| S | S | S |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
388 | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|