Job Description P76116 Confidence 99.07% Date Wed Jan 25 15:21:05 GMT 2012 Rank 138 Aligned Residues 288 % Identity 12% Template d1sq9a_ SCOP info 7-bladed beta-propeller WD40 repeat-like WD40-repeat Resolution 1.90

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.												.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	V	G	K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	.	.	.	.	.	.	.	.	.	.	.	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.									.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.									.	.	.	.	.	.	.
Template Sequence		K	A	H	D	A	D	I	F	S	V	S	A	C	N	.	.	S	F	T	V	S	C	S	G	.	.	.	.	.	.	.	D	G	Y	L	K	V	W	D	N	K	L	L	D	N	E	N	P	K	D	K	S	Y	S	H	F	V	H	K	S	G	L	H	H	V	D	V	L	Q	A	I	E	R	D	A	F	E	L	C	L
Template Known Secondary structure		S		S	S	S									S	.	.	S							T	.	.	.	.	.	.	.	T	S							S	B			T	T			G	G	G	G								T	T													T	T	T
Template Predicted Secondary structure																.	.									.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
				106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure		.	.																																																																						.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																																						.	.	.	.	.	.	.	.	.
Query Sequence		.	.	G	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	.	.	.	.	.	.	.	.	.
Query Conservation		.	.																																																																						.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	T	T	S	F	S	G	D	L	L	F	Y	R	I	T	R	E	D	E	T	K	K	V	I	F	E	K	L	D	L	L	D	S	D	M	K	K	H	S	F	W	A	L	K	W	G	A	S	N	S	H	R	L	V	A	T	D	V	K	G	T	T	Y	I	W	K	F	H	P	F	A	D	E	S	N	S	L	T	L
Template Known Secondary structure							T	T	S											T	T	T											S		T	T	G	G	G	S																				T	T	S									S	S	S	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
										175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																						.
Template Conservation																																																															.
Template Sequence		N	W	S	P	T	L	E	L	Q	G	T	V	E	S	P	M	T	P	S	Q	F	A	T	S	V	D	I	S	E	R	G	L	I	A	T	G	F	N	N	G	T	V	Q	I	S	E	L	S	T	L	R	P	L	Y	N	F	E	S	Q	H	N	.	N	S	N	S	I	R	S	V	K	F	S	P	Q	G	S	L	L	A
Template Known Secondary structure																S	S	S	S											T	T	S							T	T	S							T	T	T	T												.												S	S	T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		247	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.								270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure								.	.																		.	.	.	.	.	.	.																																											.	.	.	.	.	.
Query SS confidence								.	.																		.	.	.	.	.	.	.																																											.	.	.	.	.	.
Query Sequence		I	T	D	S	K	A	.	.	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	.	.	.	.	.	.	.	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	.	.	.	.	.	.
Query Conservation								.	.																		.	.	.	.	.	.	.																																											.	.	.	.	.	.
Alig confidence								.	.																		.	.	.	.	.	.	.																					.																						.	.	.	.	.	.
Template Conservation																																																						.
Template Sequence		I	A	H	D	S	N	S	F	G	C	I	T	L	Y	E	T	E	F	G	E	R	I	G	S	L	S	V	P	G	E	F	A	H	S	S	W	V	M	S	L	S	F	N	D	S	G	E	T	L	C	S	A	.	G	W	D	G	K	L	R	F	W	D	V	K	T	K	E	R	I	T	T	L	N	M	H	C	D	D	I
Template Known Secondary structure							T	T									T	T	T									B				B	S	B	S	S									S	S	S	S						.		T	T	S							T	T	T	T										G	G	G
Template Predicted Secondary structure																																																						.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
																		312	.	.	.	.	.	.	.	320	.											.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	T	H	P	N	S	L	A	L	.	.	.	.	.	.	.	.	.	.	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	E	E	D	I	L	A	V	D	E	H	G	D	S	L	A	E	P	G	V	F	D	V	K	F	L	K	K	G	W	R	S	G	M	G	A	D	L	N	E	S	L	C	C	V	C	L	D	R
Template Known Secondary structure		S	S	G	G	G				B		T	T	S		B		S	S											T	T	T	S	B	S	T	T		T	T	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions