Job Description P76116 Confidence 99.74% Date Wed Jan 25 15:21:05 GMT 2012 Rank 46 Aligned Residues 253 % Identity 13% Template d1npea_ SCOP info 6-bladed beta-propeller YWTD domain YWTD domain Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.
Query Sequence		E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	.	.	.	.	.	.	Q	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G
Query Conservation																																	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.
Template Sequence		G	T	H	L	L	F	A	Q	T	.	.	.	.	.	.	.	.	G	K	I	E	R	L	P	L	E	R	N	T	M	K	K	T	E	A	K	A	F	L	H	I	P	A	K	V	I	I	G	L	A	F	D	C	V	D	K	V	V	Y	W	T	D	I	S	E	P	S	I	G	R	A	S	L	H	G	G	E	P	T	T
Template Known Secondary structure											.	.	.	.	.	.	.	.									S	S	S		B		G	G	G																			T	T	T	T							T	T	T	T							S	S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.
Template SS confidence
		913	.	.	.	.	.	.	920	.									.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.																						.
Template Conservation									.	.	.	.	.	.	.	.	.																						.
Template Sequence		I	I	R	Q	D	L	G	.	.	.	.	.	.	.	.	.	S	P	E	G	I	A	L	D	H	L	G	R	T	I	F	W	T	D	S	Q	L	.	D	R	I	E	V	A	K	M	D	G	T	Q	R	R	V	L	F	D	T	G	L	V	N	P	R	G	I	V	T	D	P	V	R	G	N	L	Y	W	T	D	W	N
Template Known Secondary structure					T	T			.	.	.	.	.	.	.	.	.									T	T	T	T							T	T	T	.	T							T	T	S		S							S	S		S	S								T	T	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		985	.	.	.	.	990	.										.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.		.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E
Query Conservation
Alig confidence																										.																																																.
Template Conservation																										.																																																.
Template Sequence		R	D	N	P	K	I	E	T	S	H	M	D	G	T	N	R	R	I	L	A	Q	D	N	L	.	G	L	P	N	G	L	T	F	D	A	F	S	S	Q	L	C	W	V	D	A	G	T	H	R	A	E	C	L	N	P	A	Q	P	G	R	R	K	V	L	E	G	L	Q	Y	P	F	A	.	V	T	S	Y	G	K	N
Template Known Secondary structure		S	S	S								T	T	S									T	T		.	S									T	T	T	T							T	T	T	T							T	T													S				.					T	T
Template Predicted Secondary structure																										.																																																.
Template SS confidence
		1055	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.		.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.		.	.	.	.	1130	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	P	.	.	N	S	L	A	L	S	A	D
Query Conservation																																	.	.
Alig confidence																																	.	.
Template Conservation
Template Sequence		L	Y	Y	T	D	W	K	T	N	S	V	I	A	M	D	L	A	I	S	K	E	M	D	T	F	H	P	H	K	Q	T	R	L	Y	G	I	T	I	A	L	S
Template Known Secondary structure							T	T	T	T							T	T	T	T									S	S												S
Template Predicted Secondary structure
Template SS confidence
		1133	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions