Job Description P76116 Confidence 99.65% Date Wed Jan 25 15:21:05 GMT 2012 Rank 63 Aligned Residues 292 % Identity 8% Template d1mdah_ SCOP info 7-bladed beta-propeller YVTN repeat-like/Quinoprotein amine dehydrogenase Methylamine dehydrogenase, H-chain Resolution 2.50

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.										.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	.	.	.	.	.	.	.	.	.	T	V	N	S	A	V	T	A	I	D	A	K	T	G
Query Conservation																																																											.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																							.																	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																							.
Template Sequence		I	S	R	R	S	H	I	T	L	P	A	Y	F	A	G	T	.	.	T	E	N	W	V	S	C	A	G	C	G	V	T	L	G	H	S	L	G	A	F	L	.	S	L	A	V	A	G	H	S	G	S	D	F	A	L	A	S	T	S	F	A	R	S	A	K	G	K	R	T	D	Y	V	E	V	F	D	P	V	T	F
Template Known Secondary structure			T	T								T	T	T		S	S	.	.								T	T	T	T										T	T	.							T	T	S	S										T	T	T	T	S	S	S										T	T	T
Template Predicted Secondary structure																		.	.																							.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T
Query Conservation
Alig confidence																		.	.																													.																	.
Template Conservation																		.	.																													.																	.
Template Sequence		L	P	I	A	D	I	E	L	P	D	A	P	R	F	S	V	.	.	G	P	R	V	H	I	I	G	N	C	A	S	S	A	C	L	L	F	F	L	F	G	S	S	A	A	A	G	.	L	S	V	P	G	A	S	D	D	Q	L	T	K	S	A	S	.	C	F	H	I	H	P	G	A	A	A	T	H	Y	L	G	S
Template Known Secondary structure										T	T	S		S				.	.	S			T	T	S					T	T	S	S								S	S	S					.				T	T	T									S	S	.									T	T
Template Predicted Secondary structure																		.	.																													.																	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.
Template Sequence		C	P	A	S	L	A	A	S	D	L	A	A	A	P	A	A	A	G	I	V	G	A	Q	C	T	G	A	Q	N	C	S	S	Q	A	A	Q	A	N	Y	P	G	M	L	V	W	A	V	A	S	.	S	I	L	Q	G	D	I	P	A	A	G	A	T	M	K	A	A	I	D	G	N	E	S	G	R	K	A	D	N	F
Template Known Secondary structure			T	T	S								S	S											S		T	T	S		B		S						T	T	T	T						B	S	S	.									S	S										S	S		T					T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
				272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.									.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure		.	.																								.	.	.	.	.	.	.	.																																		.
Query SS confidence		.	.																								.	.	.	.	.	.	.	.																																		.
Query Sequence		.	.	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	.	.	.	.	.	.	.	.	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	P	N	S	L	A	L	S	A	D	G	K	T	.	L	Y	V	S	V	K	Q	K	S	T	K	Q	Q
Query Conservation		.	.																								.	.	.	.	.	.	.	.																																		.
Alig confidence		.	.																								.	.	.	.	.	.	.	.																																		.
Template Conservation
Template Sequence		R	S	A	G	F	Q	M	V	A	K	L	K	N	T	D	G	I	M	I	L	T	V	E	H	S	R	S	C	L	A	A	A	E	N	T	S	S	V	T	A	S	V	G	Q	T	S	G	P	I	S	N	G	H	D	S	D	A	I	I	A	A	Q	D	G	A	S	D	N	Y	A	N	S	A	G	T	E	V	L	D	I
Template Known Secondary structure					S	S	S						T	T	T	T										S	S		T	T	S										S	S	S																					S	S	S								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		341	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	T	Q	P	D	D	V	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	A	A	S	D	Q	D	Q	S
Template Known Secondary structure				S	S	S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions