Job Description P76116 Confidence 89.38% Date Wed Jan 25 15:21:05 GMT 2012 Rank 179 Aligned Residues 309 % Identity 11% Template d1k3ia3 SCOP info 7-bladed beta-propeller Galactose oxidase, central domain Galactose oxidase, central domain Resolution 1.40

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.						70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.												.	.	.
Query SS confidence																																													.	.	.	.	.												.	.	.
Query Sequence		S	T	Q	A	A	E	E	M	L	R	K	A	V	G	K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	.	.	.	.	.	V	V	Y	R	L	D	P	V	T	L	E	.	.	.	V	T	Q	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N
Query Conservation																																													.	.	.	.	.												.	.	.
Alig confidence																																													.	.	.	.	.												.	.	.
Template Conservation
Template Sequence		Q	P	G	L	G	R	W	G	P	T	I	D	L	P	I	V	P	A	A	A	A	I	E	P	T	S	G	R	V	L	M	W	S	S	Y	R	N	D	A	F	G	G	S	P	G	G	I	T	L	T	S	S	W	D	P	S	T	G	I	V	S	D	R	T	V	T	V	T	K	H	D	M	F	P	G	I	S	M	D	G
Template Known Secondary structure			T	T	S										S	S			S						T	T	T	T											T	T	T		S				S									T	T	T			B									S											T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T
Query Conservation
Alig confidence																																																								.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		N	G	Q	I	V	V	T	G	G	N	D	A	K	K	T	S	L	Y	D	S	S	S	D	S	W	I	P	G	P	D	M	Q	V	A	R	G	Y	Q	S	S	A	T	M	S	D	G	R	V	F	T	I	G	G	S	.	.	.	.	W	S	G	G	V	F	E	K	N	G	E	V	Y	S	P	S	S	K	T	W	T	S
Template Known Secondary structure		T	S							S	S	S	T	T							G	G	G	T									S	S			S	S							T	T	S									.	.	.	.			S	S	S										T	T	T	T
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		179	180	.	.	.	.	.	.	.	.	.															190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Query Sequence		A	I	Q	N	T	G	K	M	S	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	.	.	.	.	D	G	K	E	H	F	F	I	N	I	S	L	D	T
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Template Conservation
Template Sequence		L	P	N	A	K	V	N	P	M	L	T	A	D	K	Q	G	L	Y	R	S	D	N	H	A	W	L	F	G	W	K	K	G	S	V	F	Q	A	G	P	S	T	A	M	N	W	Y	Y	T	S	G	S	G	D	V	K	S	A	G	K	R	Q	S	N	R	G	V	A	P	D	A	M	C	G	N	A	V	M	Y	D	A
Template Known Secondary structure			T	T	S		S	G	G	G					T	T	G	G	G	T	T	T		S							G	G	G							S	S	S								S	T	T												T	T							B	T								T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.																.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	G	K	I	L	T	F	G	G	S	P	D	Y	Q	D	S	D	A	T	T	N	A	H	I	I	T	L	G	E	P	G	T	S	P	N	T	V	F	A	S	N	G	L	Y	F	A	R	T	F	H	T	S	V	V	L	P	D	G	S	T	F	I	T	G	G	Q	R	R	G	I	P	F	E	D	S	T	P	V	F
Template Known Secondary structure		T	T	T								B	S	S	S	S	S	S	B												S	T	T	S								T	T			S	S			B	S							T	T	S								B	S	B			T	T				S	B
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
			296	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.											.	.																.
Query SS confidence		.											.	.																.
Query Sequence		.	V	S	V	I	D	A	K	S	Y	K	.	.	V	V	K	T	F	D	T	P	T	H	P	N	S	L	A	.	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K	S	T	K	Q
Query Conservation		.											.	.																.
Alig confidence		.											.	.																.
Template Conservation
Template Sequence		T	P	E	I	Y	V	P	E	Q	D	T	F	Y	K	Q	N	P	N	S	I	V	R	V	Y	H	S	I	S	L	L	L	P	D	G	R	V	F	N	G	G	G	G	L	C	G	D	C	T
Template Known Secondary structure								G	G	G	T									S	S				T	T							T	T	S											T	T		S
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions