Return to main results Retrieve Phyre Job Id

Job DescriptionP76116
Confidence99.93%DateWed Jan 25 15:21:05 GMT 2012
Rank22Aligned Residues287
% Identity13%Templated1fwxa2
SCOP info7-bladed beta-propeller Nitrous oxide reductase, N-terminal domain Nitrous oxide reductase, N-terminal domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80..... ....90.........100.........110...
Predicted Secondary structure 






















..













......
Query SS confidence 











































. .



























. . . . . .
Query Sequence  GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI. . HNDLKPFGATINNTTQTLWFGNTVNSAV. . . . . .
Query Conservation       
 



  
 

          
 
 


  
  
   
..  
  
  

   

  
 
       
......
Alig confidence 



















......

















..



























......
Template Conservation   
     
 

  
 

   ......   
 



 
        
      
 

 



 
 

       
      
Template Sequence  HMSFTEGKYDGRFLFMNDKA. . . . . . NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDG
Template Known Secondary structure  TTTT......TTTTTT
SS

S

SSB
S
S
SS
SS
Template Predicted Secondary structure 









......




























Template SS confidence 















































































   82.......90.........100. ........110.........120.........130.........140.........150.....
 
   114.....120.........130.........140.........150.........160.........170.........180
Predicted Secondary structure  .............






























Query SS confidence  . . . . . . . . . . . . .


































































Query Sequence  . . . . . . . . . . . . . TAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI
Query Conservation  .............   
         
                                                     
Alig confidence  .............
























































..........
Template Conservation              
 
 
  
      
        
  



  
   
  
   
              ..........
Template Sequence  TNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIV. . . . . . . . . .
Template Known Secondary structure  SSTT
GGGTTTTSS




SSSSS
TT

SST

S..........
Template Predicted Secondary structure 






































..........
Template SS confidence 















































































   156...160.........170.........180.........190.........200.........210.........220.....
 
   181........190.........200.........210.........220.........230.........240.........250.........260
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  QNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT
Query Conservation                                                                                  
Alig confidence  ..














.

























.....






























Template Conservation  ..       
  



 .        

   
         
  .....   
 
   



     
   
  
 
 
 
Template Sequence  . . VFNIAEIEKAIAAGD. YQELNGVKVVDGRKEASSLFTRYIPI. . . . . ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDV
Template Known Secondary structure  ..T
.STT
SGGG

SS.....SS



TTSS
TTSSBG
Template Predicted Secondary structure  ..







.










.....













Template SS confidence 















































































   225....230......... 240.........250.........260..... ....270.........280.........290......
 
   261........270....... ..280.........290.........300.. .......310....
Predicted Secondary structure 






.............









..........




...
Query SS confidence 
















. . . . . . . . . . . . .
























. . . . . . . . . .











. . .
Query Sequence  RNGNILAKVAAPESLAV. . . . . . . . . . . . . LFNPARNEAYVTHRQAGKVSVIDAK. . . . . . . . . . SYKVVKTFDTPT. . .
Query Conservation                   .............     
  


       
 
 
  ..........
      
  
 ...
Alig confidence 
















.............






.
















..........











...
Template Conservation                  
        
     

  
 .   
 
 
  
  
                           
Template Sequence  TRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGN. AYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPG
Template Known Secondary structure  GGS


GGGG

B

S

TTS.TTTTT
S



SS
Template Predicted Secondary structure 




















.

























Template SS confidence 















































































   297..300.........310.........320.........330... ......340.........350.........360.........370.....
 
   315....320.........330.. .......340.........350...
Predicted Secondary structure  ...






..















Query SS confidence  . . .

















. .




















Query Sequence  . . . HPNSLALSADGKTLYVSV. . KQKSTKQQEATQPDDVIRIAL
Query Conservation  ... 
  

 



  



 ..               
     
Alig confidence  ...

















..




















Template Conservation 
   
  
  



  
 
 
  
 

        
    
   
Template Sequence  HLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDI
Template Known Secondary structure  TTTTSTT

SSS

TTSS



SS


Template Predicted Secondary structure 



























Template SS confidence 











































   376...380.........390.........400.........410.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions