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Job DescriptionP76116
Confidence99.71%DateWed Jan 25 15:21:05 GMT 2012
Rank53Aligned Residues245
% Identity9%Templatec3tc9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hypothetical hydrolase; PDBTitle: crystal structure of a hypothetical hydrolase (bt_3476) from2 bacteroides thetaiotaomicron vpi-5482 at 2.23 a resolution
Resolution2.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWV
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Template Sequence  GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSXIITNDQNNN. . . . . . DRPNNYIL
Template Known Secondary structure  S


TTBTTTTT


S

TTSS

S
T......TS
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   164.....170.........180.........190.........200.........210.........220......... 230.......
 
   169170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  VDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT
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Template Sequence  TRESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTI. . . QDSGWEFHIQFHPSGNYAYIV
Template Known Secondary structure  GGGTS
S
SS



TTT

TTTT
TTT


...SSSS


TTSS
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   238.240.........250.........260.........270.........280.........290... ......300.........310....
 
   249250.........260.. .......270.........280.........290........
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Query Sequence  DSKAAEVLVVDTRN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSV
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Template Sequence  VVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARXHAPRQGTFVKNPAYKGSSDEYD. FYFCDRENHCIRI
Template Known Secondary structure  TTTTTTTT



TT
B

B
GGG
BBSS
GGGTTSS

.GGGT
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   315....320.........330.........340.........350.........360.........370.........380 .........390...
 
   299300.........310..... ....320.........330.........340....
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Query Sequence  IDAKSYKVVKTFDTPTH. . . . . . . . . . . . . . . . . . PNSLALSADGKTLYVSVKQKSTKQQEATQ
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Template Sequence  LT. PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE
Template Known Secondary structure 
.TTS

TT
SBS
B
TTTT
BBSSTTTTGGGT
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   394. ....400.........410.........420.........430.........440.........450......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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