Job Description P76116 Confidence 99.09% Date Wed Jan 25 15:21:05 GMT 2012 Rank 136 Aligned Residues 271 % Identity 12% Template c3ow8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:wd repeat-containing protein 61; PDBTitle: crystal structure of the wd repeat-containing protein 61 Resolution 2.30 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		V	G	K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	.	.	.	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A
Query Conservation																																																				.	.	.
Alig confidence												.	.	.										.	.	.	.	.	.	.																						.	.	.																			.
Template Conservation												.	.	.										.	.	.	.	.	.	.																																											.
Template Sequence		H	D	D	A	I	W	S	V	A	W	.	.	.	G	E	T	V	V	T	G	S	L	.	.	.	.	.	.	.	D	D	L	V	K	V	W	K	W	R	D	E	R	L	D	L	Q	W	S	L	E	G	H	Q	L	G	V	V	S	V	D	I	S	H	T	L	P	I	A	A	S	S	.	S	L	D	A	H	I	R	L
Template Known Secondary structure		S	S	S								.	.	.									T	.	.	.	.	.	.	.	T	S									T	T												S	S									S	S	S	S						.		T	T	S
Template Predicted Secondary structure												.	.	.										.	.	.	.	.	.	.																																											.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	D	L	E	N	G	K	Q	I	K	S	I	D	A	G	P	V	D	A	W	T	L	A	F	S	P	D	S	Q	Y	L	A	T	G	.	.	.	.	.	.	.	.	.	.	.	T	H	V	G	K	V	N	I	F	G	V	E	S	G	K	K	E	Y	S	L	D	T	R	G	K	F	I	L	S	I	A	Y	S	P	D
Template Known Secondary structure				T	T	T	T										T	T									T	T	S	S						.	.	.	.	.	.	.	.	.	.	.		T	T	S							T	T	T		S								S	S	S									T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.												.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	P	E	S	L
Query Conservation
Alig confidence																														.	.	.	.
Template Conservation																														.	.	.	.
Template Sequence		G	K	Y	L	A	S	G	A	I	D	G	I	I	N	I	F	D	I	A	T	G	K	L	L	H	T	L	E	.	.	.	.	G	H	A	M	P	I	R	S	L	T	F	S	P	D	S	Q	L	L	V	T	A	S	D	D	G	Y	I	K	I	Y	D	V	Q	H	A	N	L	A	G	T	L	S	G	H	A	S	W	V
Template Known Secondary structure		S	S							T	T	S							T	T	T	T								.	.	.	.			S	S									T	T	S								T	T	S							T	T	T											S	S
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	P	.	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		L	N	V	A	F	C	P	D	D	T	H	F	V	S	S	S	S	D	K	S	V	K	V	W	D	V	G	T	R	T	C	V	H	T	F	F	D	H	Q	D	Q	V	W	G	V	K	Y	N	G	N	G	S	K	I	V	S	V	G	D	D	Q
Template Known Secondary structure								T	T	S	S							T	T	S							T	T	T	T										S	S									T	T	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions