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Job DescriptionP76116
Confidence22.07%DateWed Jan 25 15:21:05 GMT 2012
Rank195Aligned Residues110
% Identity11%Templatec3okyA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:plexin-a2; PDBTitle: plexin a2 in complex with semaphorin 6a
Resolution2.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.........80........ .90.........
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Query Sequence  EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND. . . . . . . . . . . . . . . . . . . . . . . . . LKPFGATINNT
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Template Sequence  HLTVHRRTGAVYVGAI. . . . . . . . NRVYKLTG. NLTIQVAHKTGPEEDNKACYPPLIVQPCSEVLTLTNNVNKLLIIDYS
Template Known Secondary structure 
TTT

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T.T





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GG
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   52.......60....... ..70..... ....80.........90.........100.........110.........120..
 
   100......... 110.........120.........130.........140......... 150.........160...
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Query Sequence  TQTLWFGNTV. NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVAD. . . DATNTVYISGIGKE
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Template Sequence  ENRLLACGSLYQGVCKLLRLDDLFILVEPSHKKEHYLSSVNKTGTMYGVIVRSEGEDGKLFIGTAVDG
Template Known Secondary structure  GT
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   123......130.........140.........150.........160.........170.........180.........190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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