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Job Description | P76116 | Confidence | 22.07% | Date | Wed Jan 25 15:21:05 GMT 2012 |
Rank | 195 | Aligned Residues | 110 |
% Identity | 11% | Template | c3okyA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:plexin-a2; |
PDBTitle: plexin a2 in complex with semaphorin 6a
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Resolution | 2.19 Å |
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. | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
E | M | A | Y | S | Q | Q | E | N | A | L | W | L | A | T | S | Q | S | R | K | L | D | K | G | G | V | V | Y | R | L | D | P | V | T | L | E | V | T | Q | A | I | H | N | D | . |
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L | K | P | F | G | A | T | I | N | N | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | L | T | V | H | R | R | T | G | A | V | Y | V | G | A | I | . |
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N | R | V | Y | K | L | T | G | . |
N | L | T | I | Q | V | A | H | K | T | G | P | E | E | D | N | K | A | C | Y | P | P | L | I | V | Q | P | C | S | E | V | L | T | L | T | N | N | V | N | K | L | L | I | I | D | Y | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
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. | . | 70 | . | . | . | . | . | |
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110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
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150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | Q | T | L | W | F | G | N | T | V | . |
N | S | A | V | T | A | I | D | A | K | T | G | E | V | K | G | R | L | V | L | D | D | R | K | R | T | E | E | V | R | P | L | Q | P | R | E | L | V | A | D | . |
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D | A | T | N | T | V | Y | I | S | G | I | G | K | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | N | R | L | L | A | C | G | S | L | Y | Q | G | V | C | K | L | L | R | L | D | D | L | F | I | L | V | E | P | S | H | K | K | E | H | Y | L | S | S | V | N | K | T | G | T | M | Y | G | V | I | V | R | S | E | G | E | D | G | K | L | F | I | G | T | A | V | D | G |
Template Known Secondary structure |   |
G | T |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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