Job Description P76116 Confidence 68.21% Date Wed Jan 25 15:21:05 GMT 2012 Rank 184 Aligned Residues 106 % Identity 10% Template c3oktA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:plexin-a2; PDBTitle: mouse plexin a2, extracellular domains 1-4 Resolution 2.30 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																										.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	K	P	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	I	N	N
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.								.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.								.
Template Sequence		N	H	L	T	V	H	R	R	T	G	A	V	Y	V	G	A	I	.	.	.	.	.	.	.	.	N	R	V	Y	K	L	T	.	G	N	L	T	I	Q	V	A	H	K	T	G	P	E	E	D	N	K	A	C	Y	P	P	L	I	V	Q	P	C	S	E	V	L	T	L	T	N	N	V	N	K	L	L	I	I	D	Y
Template Known Secondary structure								T	T	T								T	.	.	.	.	.	.	.	.	T							.	T	T																T	T		S	S		T	T	T	S				S																G
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.								.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.									.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		99	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.
Predicted Secondary structure												.																																												.	.	.
Query SS confidence												.																																												.	.	.
Query Sequence		T	T	Q	T	L	W	F	G	N	T	.	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	.	.	.	T	N	T	V	Y	I	S
Query Conservation												.																																												.	.	.
Alig confidence												.																																												.	.	.
Template Conservation
Template Sequence		S	E	N	R	L	L	A	C	G	S	L	Y	Q	G	V	C	K	L	L	R	L	D	D	L	F	I	L	V	E	P	S	H	K	K	E	H	Y	L	S	S	V	N	K	T	G	T	M	Y	G	V	I	V	R	S	E	G	E	D	G	K	L	F	I	G
Template Known Secondary structure		G	G	T							S	G	G	G	T							T	T	T									S	S	G	G	G								S	S	S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions