Phyre 2 alignment of P76116 with c3kyaA

Job Description P76116
Confidence 99.11% Date Wed Jan 25 15:21:05 GMT 2012

Rank 135 Aligned Residues 258

% Identity 12% Template c3kyaA_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative phosphatase; PDBTitle: crystal structure of putative phosphatase (np_812416.1) from2 bacteroides thetaiotaomicron vpi-5482 at 1.77 a resolution

Resolution 1.77 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	89	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure														.																																.	.
Query SS confidence														.																																.	.
Query Sequence	L	K	P	F	G	A	T	I	N	N	T	T	Q	.	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	.	.	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V
Query Conservation														.																																.	.
Alig confidence														.																																.	.
Template Conservation
Template Sequence	S	D	N	G	R	L	A	F	D	P	L	N	K	D	H	L	Y	I	C	Y	D	G	H	K	A	I	Q	L	I	D	L	K	N	R	X	L	S	S	P	L	N	I	N	T	I	P	T	N	R	I	R	S	I	A	F	N	K	K	I	E	G	Y	A	D	E	A	E	Y	X	I	V	A	I	D	Y	D	G	K	G	D
Template Known Secondary structure		S								T	T											T									T	T	T	T									T	T	S	S		S	B										B	T	T	T	B		T	T											T	T	G	G
Template Predicted Secondary structure
Template SS confidence
	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

	166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	E	S	P	S	V	Y	I	I	K	R	N	A	D	G	T	F	D	D	R	S	D	I	Q	L	I	A	A	Y	K	Q	C	N	G	A	T	I	H	P	I	N	G	E	L	Y	F	N	S	Y	E	K	G	Q	V	F	R	L	D	L	V	D	Y	F	K	T	I	K	N	G	G	S	W	D	P	I	V	K	N	N	P	N
Template Known Secondary structure	G											T	T	S			S	T	T	S									S									T	T	T								T	T	T	T																T	T						B	G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
	241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.																						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	I	L	A	K	V	A	A	P	E	S	L	A	V	L
Query Conservation	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	T	F	K	Q	L	F	T	I	A	D	P	S	W	E	F	Q	I	F	I	H	P	T	G	K	Y	A	Y	F	G	V	I	N	N	H	Y	F	X	R	S	D	Y	D	E	I	K	K	E	F	I	T	P	Y	N	F	V	G	G	Y	K	Q	S	G	Y	R	D	D	V	G	T	E	A	R	X	N	N	P	C	Q	G	V
Template Known Secondary structure	T								S	S	S	S									T	T	S	S							T	T	T	T									T	T	T	T											B	T	T	B				B			B	G	G	G		B		S	S
Template Predicted Secondary structure
Template SS confidence
	321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

	279	280								.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.																									.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	F	N	.	.	.	.	.	.	.	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	S	L	A	L	S	A	D	G	K	T
Query Conservation			.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.																					.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence	F	V	K	N	P	D	Y	T	G	E	E	E	Y	D	F	Y	F	V	D	R	L	N	F	C	V	R	K	V	T	.	P	E	G	I	V	S	T	Y	A	G	R	G	A	S	T	S	L	A	D	G	N	Q	W	G	T	D	D	G	D	L	R	E	V	A	R	F	R	D	V	S	G	L	V	Y	D	D	V	K	E	X
Template Known Secondary structure					T	T			S	S										G	G	G	T							.	T	T		B							S		T	T						S		S								T	T	T	T				S	S								T	T	T	T
Template Predicted Secondary structure																														.
Template SS confidence
	401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

	328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	Y	V	S	V	K	Q	K	S	T	K	Q	Q	E	A	T	Q	P	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence	F	Y	V	H	D	Q	V	G	H	T	I	R	T	I	S	X	E	Q	E	E
Template Known Secondary structure						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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