Job Description P76116 Confidence 99.14% Date Wed Jan 25 15:21:05 GMT 2012 Rank 134 Aligned Residues 285 % Identity 9% Template c3hxjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyrrolo-quinoline quinone; PDBTitle: crystal structure of pyrrolo-quinoline quinone (pqq_dh) from2 methanococcus maripaludis, northeast structural genomics consortium3 target mrr86 Resolution 2.00 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																							.										.	.	.	.	.	.
Query SS confidence																																																							.										.	.	.	.	.	.
Query Sequence		G	K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	K	P	F	.	G	A	T	I	N	N	T	T	Q	.	.	.	.	.	.	T	L	W	F	G	N	T	V	N	S	A
Query Conservation																																																							.										.	.	.	.	.	.
Alig confidence																.							.	.	.	.	.	.	.									.																	.										.	.	.	.	.	.
Template Conservation																.							.	.	.	.	.	.	.									.
Template Sequence		N	S	I	D	S	S	P	I	L	A	K	N	G	T	.	I	Y	L	G	S	S	.	.	.	.	.	.	.	N	K	N	L	Y	A	I	N	.	T	D	G	S	V	K	W	F	F	K	S	G	E	I	I	E	C	R	P	S	I	G	K	D	G	T	I	Y	F	G	S	D	K	V	Y	A	I	N	P	D	G	T	E
Template Known Secondary structure												T	T	S		.				S	S	T	.	.	.	.	.	.	.	T	T	T	T					.	T	T	S					S	S		G	G	G									T	T	T	T					S	S										G	G	G
Template Predicted Secondary structure																.							.	.	.	.	.	.	.									.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.								.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	W	R	F	D	T	S	D	F	T	I	F	E	D	I	L	Y	V	T	S	X	D	G	H	L	Y	A	I	N	T	D	G	T	E	K	W	R	F	K	T	K	K	A	I	Y	A	T	P	I	V	S	E	D	G	T	I	Y	V	G	S	N	D	N	Y	L	Y	A	I	N	P	D	G	T	E	K	W	R	F	K	T
Template Known Secondary structure		G	G	G	S									T	T							T	T	S							T	T	S									S	S				S						T	T	S							T	T	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	D	A	I	T	S	A	A	S	I	G	K	D	G	T	I	Y	F	G	S	D	K	V	Y	A	I	N	P	D	G	T	E	K	W	N	F	Y	A	G	Y	W	T	V	T	R	P	A	I	S	E	D	G	T	I	Y	V	T	S	L	D	G	H	L	Y	A	I	N	P	D	G	T	E	K	W	R	F	K	T	G	K
Template Known Secondary structure		S	S				S						T	T							S	S	S						T	T	S									S	S				S						T	T	S							T	T	T							T	T	S									S	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	P	.	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K	S
Query Conservation																																														.
Alig confidence																			.												.															.											.
Template Conservation																			.												.																										.
Template Sequence		R	I	E	S	S	P	V	I	G	N	T	D	T	I	Y	F	G	.	S	Y	D	G	H	L	Y	A	I	N	P	.	D	G	T	E	K	W	N	F	E	T	G	S	W	I	I	A	T	P	V	I	D	E	N	G	T	.	I	Y	F	G	T	R	N	G	K
Template Known Secondary structure					S						T	T	S						.		T	T								T	.	T	S									S	S				S						T	T			.						T	T	S
Template Predicted Secondary structure																			.												.																										.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions