 |
Job Description | P76116 | Confidence | 26.49% | Date | Wed Jan 25 15:21:05 GMT 2012 |
Rank | 192 | Aligned Residues | 75 |
% Identity | 12% | Template | c3hx6A_ |
PDB info |
PDB header:cell adhesion | Chain: A: PDB Molecule:type 4 fimbrial biogenesis protein pily1; |
PDBTitle: crystal structure of pseudomonas aeruginosa pily1 c-terminal2 domain
|
Resolution | 2.10 Å |
|
 |
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
|
|
. | 90 | . | . | . | . | . | |
|
|
|
. | . | . | . | 100 | . | |
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  | . | . | . | . |  |
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | M | A | Y | S | Q | Q | E | N | A | L | W | L | A | T | S | Q | S | R | K | L | D | K | G | G | V | V | Y | R | L | D | P | V | T | L | E | V | T | Q | A | I | H | N | D | . |
. |
. |
L | K | P | F | G | A | T | . |
. |
. |
. |
I | N | N | T | T | Q | . |
. |
. |
. |
T | L | W | F | G | N | T | V | N | S | A | V |
Query Conservation |   |
  |   |
|   |
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |
| . | . | . |   |   |
|   |   |
|
| . | . | . | . |   |   |   |
|
|   | . | . | . | . |   |
|   |
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|
|   |
|   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|   | . |
|
|
|
Template Sequence |   |
T | V | A | R | L | H | N | G | K | W | A | V | V | T | G | N | G | Y | S | S | M | N | D | K | A | A | L | L | I | I | D | M | E | T | G | A | I | T | R | K | L | E | V | T | G | R | T | G | V | P | N | G | L | S | S | P | R | L | A | D | N | N | S | D | G | V | A | D | Y | A | Y | A | G | D | L | Q | . |
G | N | L |
Template Known Secondary structure |   |
 |  |  |  |
| T | T | S | S |  |  |  |  |  |  |
|
| B | S |
| T | T |
|
|  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |
|
| S | T | T | S |
|
|
|  |  |  |  |  |  |  |
| T | T | S | S | S | B |
|
|  |  |  |  |  |  | T | T | . | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
792 | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | |
. | . | 870 |
  |
  |   |
114 | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
T | A | I | D | A | K | T |
Query Conservation |   |
  |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |
Template Sequence |   |
W | R | F | D | L | I | A |
Template Known Secondary structure |   |
 |  |  |  |
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
871 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|