Job Description P76116 Confidence 99.86% Date Wed Jan 25 15:21:05 GMT 2012 Rank 33 Aligned Residues 239 % Identity 14% Template c3g4hB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:regucalcin; PDBTitle: crystal structure of human senescence marker protein-30 (zinc bound) Resolution 1.92 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E
Query Conservation
Alig confidence																				.	.	.	.	.	.															.																											.	.	.
Template Conservation																				.	.	.	.	.	.															.																											.	.	.
Template Sequence		G	E	S	P	V	W	E	E	V	S	N	S	L	L	F	V	D	I	.	.	.	.	.	.	P	A	K	K	V	C	R	W	D	S	F	T	K	Q	.	V	Q	R	V	T	M	D	A	P	V	S	S	V	A	L	R	Q	S	G	G	Y	V	A	T	I	G	.	.	.	T	K	F	C	A	L	N	W	K	E	Q	S
Template Known Secondary structure									T	T	T	T							T	.	.	.	.	.	.	T	T	T							T	T	T			.							S	S								B	T	T	S	S						T	.	.	.	T							T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.															.																											.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T
Query Conservation
Alig confidence																				.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	V	L	A	T	V	D	N	D	K	K	N	N	R	F	N	D	.	.	.	.	.	G	K	V	D	P	A	G	R	Y	F	A	G	T	M	A	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	P	A	V
Template Known Secondary structure										T	T		T	T						.	.	.	.	.					T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	S
Template Predicted Secondary structure																				.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																																				.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.										260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.
Query Sequence		N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	.	.	.	.	.	.	.	.	.	T	R	N	G	N	I	L	A	K	V	A	A	P	E
Query Conservation																																																											.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		L	E	R	H	Q	G	A	L	Y	S	L	F	P	D	H	H	V	K	K	Y	F	D	.	.	.	.	Q	V	D	I	S	N	G	L	D	W	S	L	D	H	K	I	F	Y	Y	I	D	S	L	S	Y	S	V	D	A	F	D	Y	D	L	Q	T	G	Q	I	S	N	R	R	S	V	Y	K	L	E	K	E	E	Q	I
Template Known Secondary structure					S									T	T	S								.	.	.	.			S	B								T	T	S								G	G	G	T									T	T	T														G	G	G
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																																										.									.
Query SS confidence																																										.									.
Query Sequence		S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	.	T	H	P	N	S	L	A	L	.	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K	S
Query Conservation																																										.									.
Alig confidence													.																													.									.
Template Conservation													.
Template Sequence		P	D	G	M	C	I	D	A	E	G	K	.	L	W	V	A	C	Y	N	G	G	R	V	I	R	L	D	P	V	T	G	K	R	L	Q	T	V	K	L	P	V	D	K	T	T	S	C	C	F	G	G	K	N	Y	S	E	M	Y	V	T	C	A	R	D	G
Template Known Secondary structure									T	T	S		.							T	T	T							T	T	T										S	S	S	B								S	G	G	G								B		T	T
Template Predicted Secondary structure													.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions