Job Description P76116 Confidence 98.99% Date Wed Jan 25 15:21:05 GMT 2012 Rank 142 Aligned Residues 292 % Identity 8% Template c3fm0A_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:protein ciao1; PDBTitle: crystal structure of wd40 protein ciao1 Resolution 1.70 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		G	K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	.	.	.	.	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A
Query Conservation																																																		.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		D	S	R	C	W	F	L	A	W	N	P	A	G	T	L	L	A	S	C	G	G	.	.	.	.	.	.	.	D	R	R	I	R	I	W	G	T	E	G	D	S	W	I	C	K	S	V	L	S	E	G	H	Q	R	T	V	R	K	V	A	W	S	P	C	G	N	Y	L	A	S	A	S	F	D	A	T	T	C	I	W
Template Known Secondary structure		T	S									T	T	S	S							T	.	.	.	.	.	.	.	T	S									T	T										S	S		S	S									T	T	S	S							T	T	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.								.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	.	.	.	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L
Query Conservation																																															.	.	.
Alig confidence																																															.	.	.
Template Conservation
Template Sequence		K	K	N	Q	D	F	E	C	V	T	T	L	E	G	H	E	N	E	V	K	S	V	A	W	A	P	S	G	N	L	L	A	T	C	S	R	D	K	S	V	W	V	W	E	V	D	E	E	D	E	Y	E	C	V	S	V	L	N	S	H	T	Q	D	V	K	H	V	V	W	H	P	S	Q	E	L	L	A	S	A	S
Template Known Secondary structure																	S	S									T	T	S	S							T	T	S									T	T	S													S									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	D	T	V	K	L	Y	R	E	E	E	D	D	W	V	C	C	A	T	L	E	G	H	E	S	T	V	W	S	L	A	F	D	P	S	G	Q	R	L	A	S	C	S	D	D	R	T	V	R	I	W	R	Q	Y	L	P	G	N	E	Q	G	V	A	C	S	P	S	W	K	C	I	C	T	L	S	G	F	H	S
Template Known Secondary structure		T	T	S									T	T												S	S									T	T	S	S							T	T	S										T	T		T	T																S	S		S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.										.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.												.
Query SS confidence																																			.	.	.	.	.	.	.	.	.												.
Query Sequence		E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	.	.	.	.	.	.	.	.	.	V	V	K	T	F	D	T	P	T	H	P	.	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K	S	T	K
Query Conservation																																			.	.	.	.	.	.	.	.	.												.
Alig confidence																																			.	.	.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		R	T	I	Y	D	I	A	W	C	Q	L	T	G	A	L	A	T	A	C	G	D	D	A	I	R	V	F	Q	E	D	P	N	S	D	P	Q	Q	P	T	F	S	L	T	A	H	L	H	Q	A	H	S	Q	D	V	N	C	V	A	W	N	P	K	E	P	G	L	L	A	S	C	S	D	D	G	E	V
Template Known Secondary structure		S									T	T	T								T	T	S									T	T	S		T	T	S										T	T	S	S	S	S									S	S	S	T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions