Job Description P76116 Confidence 98.96% Date Wed Jan 25 15:21:05 GMT 2012 Rank 144 Aligned Residues 297 % Identity 11% Template c3dwlH_ PDB info PDB header:structural protein Chain: H: PDB Molecule:actin-related protein 2/3 complex subunit 1; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.														.
Query SS confidence																																																			.	.														.
Query Sequence		A	E	E	M	L	R	K	A	V	G	K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	.	.	E	V	T	Q	A	I	H	N	D	L	K	P	F	.	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N
Query Conservation																																																			.	.														.
Alig confidence																																.	.	.	.	.	.	.													.	.														.															.
Template Conservation																																.	.	.	.	.	.	.																																											.
Template Sequence		A	T	S	Q	V	L	H	I	L	P	K	P	S	Y	E	H	A	F	N	S	Q	R	T	E	F	V	T	T	T	A	.	.	.	.	.	.	.	T	N	Q	V	E	L	Y	E	Q	D	G	N	G	W	K	H	A	R	T	F	S	D	H	D	K	I	V	T	C	V	D	W	A	P	K	S	N	R	I	V	T	C	.
Template Known Secondary structure											S	S			S						S	S	S	S							S	.	.	.	.	.	.	.	S	S		B							T	T								B				S	S									T	T	T							.
Template Predicted Secondary structure																																.	.	.	.	.	.	.																																											.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S
Query Conservation
Alig confidence																		.	.
Template Conservation																		.	.
Template Sequence		S	Q	D	R	N	A	Y	V	Y	T	W	K	Q	T	L	V	.	.	L	L	R	L	N	R	A	A	T	F	V	R	W	S	P	N	E	D	K	F	A	V	G	S	G	A	R	V	I	S	V	C	Y	F	E	W	W	V	S	K	H	L	K	R	P	L	R	S	T	I	L	S	L	D	W	H	P	N	N	V	L	L
Template Known Secondary structure			T	T	S	S												.	.					S	S									T	T	S	S							S	S	S							B			B							S	S			S									T	T	S	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																										.																					.	.	.
Template Conservation																																																										.
Template Sequence		A	A	G	C	A	D	R	K	A	Y	V	L	S	A	Y	V	R	D	V	D	K	P	E	A	S	V	W	G	S	R	L	P	F	N	T	V	C	A	E	Y	P	S	G	G	W	V	H	A	V	G	F	S	P	S	G	N	.	A	L	A	Y	A	G	H	D	S	S	V	T	I	A	Y	P	S	A	P	E	Q	P	P
Template Known Secondary structure						S	S	S										T	T						S		S	S		S														S	S	S								T	T	S	S	.							T	T	T									S	T	T	S
Template Predicted Secondary structure																																																										.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
			265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.																									.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.
Predicted Secondary structure		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		.	I	L	A	K	V	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	P	.	N	S
Query Conservation		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		R	A	L	I	T	V	K	L	S	Q	L	P	L	R	S	L	L	W	A	N	E	S	A	I	V	A	A	G	Y	N	Y	S	P	I	L	L	Q	G	N	E	A	H	T	R	D	L	D	A	G	T	S	K	T	S	F	T	H	T	G	N	T	G	E	G	R	E	E	S	S	L	P	T	V	H	Q	N	M	I	A	T
Template Known Secondary structure										S	S	S										T	T							S	S	S	S											S	B				S							B	S	S	S	S	S	B										S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		319	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		L	A	L	S	A	D	G	K	.	.	.	T	L	Y	V	S	V	K	Q	K	S	T	K
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		L	R	P	Y	A	G	T	P	G	N	I	T	A	F	T	S	S	G	T	D	G	R	V
Template Known Secondary structure									T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions