Job Description P76116 Confidence 99.92% Date Wed Jan 25 15:21:05 GMT 2012 Rank 24 Aligned Residues 277 % Identity 14% Template c3dsmA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bacuni_02894; PDBTitle: crystal structure of the surface layer protein bacuni_02894 from2 bacteroides uniformis, northeast structural genomics consortium3 target btr193d. Resolution 1.90 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	G	K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D
Query Conservation
Alig confidence																										.	.	.	.	.	.																																		.
Template Conservation																										.	.	.	.	.	.																																		.
Template Sequence		G	F	K	L	G	D	V	A	Q	S	X	V	I	R	D	G	I	G	W	I	V	V	N	N	.	.	.	.	.	.	S	H	V	I	F	A	I	D	I	N	T	F	K	E	V	G	R	I	T	G	F	T	S	P	R	Y	I	H	F	L	S	D	E	.	K	A	Y	V	T	Q	I	W	D	Y	R	I	F	I	I	N
Template Known Secondary structure		S	S			B	S									T	T							G	G	.	.	.	.	.	.	G	T							T	T	T											S	S									T	T	.							B	S		S
Template Predicted Secondary structure																										.	.	.	.	.	.																																		.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		A	K	T	G	E	V	K	G	R	L	V	L	D	.	.	.	.	.	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.																																																								.	.
Template Conservation																																																																											.	.
Template Sequence		P	K	T	Y	E	I	T	G	Y	I	E	C	P	D	X	D	X	E	S	G	S	T	E	Q	X	V	Q	Y	G	K	Y	V	Y	V	N	C	W	S	Y	Q	N	R	I	L	K	I	D	T	E	T	D	K	V	V	D	E	L	T	I	G	I	Q	P	T	S	L	V	X	D	K	Y	N	K	.	.	X	W	T	I	T
Template Known Secondary structure		T	T	T	T									T	T			T	T	T		B								T	T								T	T									T	T	T	T									S	S		B							T	T	S		.	.					B
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	P
Query Conservation
Alig confidence																																		.	.	.
Template Conservation																																		.	.	.
Template Sequence		D	G	G	Y	E	G	S	P	Y	G	Y	E	A	P	S	L	Y	R	I	D	A	E	T	F	T	V	E	K	Q	F	K	F	.	.	.	K	L	G	D	W	P	S	E	V	Q	L	N	G	T	R	D	T	L	Y	W	I	N	N	D	I	W	R	X	P	V	E	A	D	R	V	P	V	R	P	F	L	E	F	R	D
Template Known Secondary structure				B		T	T		S	S		B										T	T	T	T									.	.	.		T	T										T	T	S							S	S	S						T	T		S	S			S	S		S	B				S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		273		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.					.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure			.																			.	.	.	.
Query SS confidence			.																			.	.	.	.
Query Sequence		E	.	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	.	.	.	.	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	P	N	S	L	A	L	S	A	D	G	K	T
Query Conservation			.																			.	.	.	.
Alig confidence			.																			.	.	.	.										.
Template Conservation																																			.
Template Sequence		T	K	Y	Y	G	L	T	V	N	P	N	N	G	E	V	Y	V	A	D	A	I	D	Y	Q	Q	Q	G	I	V	Y	R	Y	S	.	P	Q	G	K	L	I	D	E	F	Y	V	G	I	I	P	G	A	F	C	W	K	L	E	H	H	H
Template Known Secondary structure		S									T	T	T									T	T	S	S	S									.	T	T												S
Template Predicted Secondary structure																																			.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions