Phyre 2 alignment of P76116 with c3dr2A

Job Description P76116
Confidence 99.82% Date Wed Jan 25 15:21:05 GMT 2012

Rank 37 Aligned Residues 260

% Identity 13% Template c3dr2A_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:exported gluconolactonase; PDBTitle: structural and functional analyses of xc5397 from2 xanthomonas campestris: a gluconolactonase important in3 glucose secondary metabolic pathways

Resolution 1.67 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence	A	E	E	M	L	R	K	A	V	G	K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N
Query Conservation
Alig confidence																															.	.	.	.	.	.												.																								.
Template Conservation																															.	.	.	.	.	.												.																								.
Template Sequence	A	R	L	L	T	L	Y	D	Q	A	T	W	S	E	G	P	A	W	W	E	A	Q	R	T	L	V	W	S	D	L	.	.	.	.	.	.	V	G	R	R	V	L	G	W	R	E	D	.	G	T	V	D	V	L	L	D	A	T	A	F	T	N	G	N	A	V	D	A	Q	Q	R	.	L	V	H	C	E	H	G	R
Template Known Secondary structure											S	S								G	G	G	T							T	.	.	.	.	.	.	T	T	T							T	T	.	S								S		S									T	T	S		.						T	T	T
Template Predicted Secondary structure																															.	.	.	.	.	.												.																								.
Template SS confidence
	35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.

	111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L
Query Conservation
Alig confidence																								.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	R	A	I	T	R	S	D	A	D	G	Q	A	H	L	L	V	G	R	Y	A	G	K	R	.	.	.	.	.	.	L	N	S	P	N	D	L	I	V	A	R	D	G	A	I	W	F	T	D	P	P	F	G	L	R	K	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure	T							T	T	S										T	T			.	.	.	.	.	.		S									T	T	S								S	G	G	G	S		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

	191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.
Query Sequence	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.
Alig confidence	.	.	.	.																														.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation	.	.	.	.																														.	.	.	.	.	.
Template Sequence	.	.	.	.	Q	G	C	P	A	D	P	E	L	A	H	H	S	V	Y	R	L	P	P	D	G	S	P	L	Q	R	M	A	D	.	.	.	.	.	.	L	D	H	P	N	G	L	A	F	S	P	D	E	Q	T	L	Y	V	S	Q	T	P	E	G	S	V	E	I	T	A	F	A	W	R	D	G	A	L	H	D	R
Template Known Secondary structure	.	.	.	.	G	S						S	S	S									S	S	S									.	.	.	.	.	.		S	S								T	T	S	S																					T	T
Template Predicted Secondary structure	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
					158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

	264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	N	I	L	A	K	V	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	P	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K	S	T	K	Q	Q	E	A	T
Query Conservation
Alig confidence																						.							.	.								.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.							.	.								.																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence	R	H	F	A	S	V	P	D	G	L	P	D	G	F	C	V	D	R	G	G	W	.	L	W	S	S	S	G	.	.	T	G	V	C	V	F	D	.	S	D	G	Q	L	L	G	H	I	P	T	P	G	T	A	S	N	C	T	F	D	Q	A	Q	Q	R	L	F	I	T	G	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S	S				S					T	T	S		.						S	.	.	S							.	T	T	S									S	S									T	T	S								.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.							.	.								.																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.			.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

	344	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Q	P	D	D	V	I	R	I	A	L
Query Conservation
Alig confidence	.
Template Conservation	.
Template Sequence	.	G	P	C	L	W	M	L	P	L
Template Known Secondary structure	.	T	T
Template Predicted Secondary structure	.
Template SS confidence
		296	.	.	.	300	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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