Phyre 2 alignment of P76116 with c3azqA

Job Description P76116
Confidence 89.54% Date Wed Jan 25 15:21:05 GMT 2012

Rank 178 Aligned Residues 298

% Identity 13% Template c3azqA_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:aminopeptidase; PDBTitle: crystal structure of puromycin hydrolase s511a mutant complexed with2 pgg

Resolution 2.70 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.													.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	G	K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	.	.	.	.	.	.	.	.	.	.	.	.	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence	S	R	S	G	R	P	A	C	V	G	A	V	G	D	E	V	W	W	V	A	P	R	P	A	E	.	.	A	G	R	A	T	L	V	R	R	R	A	D	G	A	E	E	S	A	L	P	A	P	W	N	V	R	N	R	V	F	E	Y	S	G	F	P	W	A	G	V	P	R	P	A	G	G	P	L	L	V	F	T	H
Template Known Secondary structure		T		S									T	T									T	T	T	.	.	T	T									T	T	S					S	S		T	T			B				G	G	G	T											S	S	S	S							B
Template Predicted Secondary structure																										.	.
Template SS confidence
	21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

	108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.									.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.
Predicted Secondary structure																															.	.	.	.	.	.	.	.																																						.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.																																						.	.	.	.
Query Sequence	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	.	.	.	.	.	.	.	.	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	.	.	.	.	K
Query Conservation																															.	.	.	.	.	.	.	.																																						.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.																																						.	.	.	.
Template Conservation
Template Sequence	F	G	D	Q	R	L	Y	A	F	E	P	D	A	P	G	G	A	V	P	R	P	L	T	P	V	S	A	V	G	G	G	L	R	W	A	D	P	V	L	L	P	E	R	G	E	V	W	C	M	A	E	E	F	T	G	E	G	P	S	D	V	R	R	F	L	A	A	V	P	L	D	G	S	A	A	A	D	R	S	A
Template Known Secondary structure	T	T	T								T	T	S	T	T								S					S	T	T											G	G	G	T											S	S	S	T	T											T	T	S	T	T	T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
	99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

	176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.									.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.
Query Sequence	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	.	.	.	.	.	.	.	.	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I
Query Conservation																															.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	V	R	E	L	S	D	D	A	H	R	F	V	T	G	P	R	L	S	P	D	G	R	Q	A	V	W	L	A	W	D	H	P	R	M	P	W	E	G	T	E	L	K	T	A	R	V	T	E	D	G	R	F	A	D	T	R	T	L	L	G	G	P	E	E	A	I	A	Q	A	E	W	A	P	D	G	S	L	I	V	A
Template Known Secondary structure	S			S	S		S		S	S									T	T	S	S									T	T			T	T	T											T	T	S											B	T	T	B									T	T	S
Template Predicted Secondary structure
Template SS confidence
	179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

	248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.												.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	P	E	S	L	.	.	.	.	.	.	.	.	.	.	.	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	P
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																																																																								.
Template Sequence	T	D	R	T	G	W	W	N	L	H	R	V	D	P	A	T	G	A	A	T	Q	L	C	R	R	E	E	E	F	A	G	P	L	W	T	P	G	M	R	W	F	A	P	L	A	N	G	L	I	A	V	V	H	G	K	G	A	A	V	L	G	I	L	D	P	E	S	G	E	L	V	.	D	A	A	G	P	W	T	E
Template Known Secondary structure			T	T	S	S								T	T	T						S				S	S	B	S	S					S	T	T			S					T	T	S							B	S	S	S								T	T	T					.				S	S
Template Predicted Secondary structure																																																																								.
Template SS confidence
	259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.

	317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K	S	T	K	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence	W	A	A	T	L	T	V	S	G	T	R	A	V	G	V	A	A	S	P	R	T	A	Y	E
Template Known Secondary structure									T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
	338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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