Job Description P76116 Confidence 90.52% Date Wed Jan 25 15:21:05 GMT 2012 Rank 177 Aligned Residues 250 % Identity 10% Template c2xe4A_ PDB info PDB header:hydrolase/inhibitor Chain: A: PDB Molecule:oligopeptidase b; PDBTitle: structure of oligopeptidase b from leishmania major Resolution 1.65 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	.	.	.	.	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																																																		.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		V	K	P	A	P	P	E	H	D	L	V	A	F	S	V	D	M	S	G	N	E	V	Y	T	I	E	F	K	R	I	S	D	P	S	Q	T	I	A	D	K	V	S	G	T	N	G	E	I	V	W	G	P	D	H	T	S	L	F	Y	V	T	K	D	E	T	L	R	E	N	K	V	W	.	.	.	.	R	H	V	M
Template Known Secondary structure						T	T	T	T									S	S	S	S	S									T	T		T	T												S						S	S	T	T									T	T								.	.	.	.				T
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	.	.	.	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A
Query Conservation																																				.	.	.
Alig confidence																																				.	.	.
Template Conservation
Template Sequence		G	K	L	Q	S	E	D	V	C	L	Y	E	E	H	N	P	L	F	S	A	F	M	Y	K	A	A	D	T	N	T	L	C	I	G	S	Q	S	P	E	T	A	E	V	H	L	L	D	L	R	K	G	N	A	H	N	T	L	E	I	V	R	P	R	E	K	G	V	R	Y	D	V	Q	M	H	G	T	S	H	L	V
Template Known Secondary structure		T	S		G	G	G										T	T									T	T	S	S									S	S									S	S	S		T	T							S	S				T	T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		246	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.								.	.	310
Predicted Secondary structure									.	.	.																								.	.	.																					.	.													.	.	.	.	.	.	.
Query SS confidence									.	.	.																								.	.	.																					.	.													.	.	.	.	.	.	.
Query Sequence		F	I	T	D	S	K	A	.	.	.	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	P	E	S	L	.	.	.	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	.	.	V	S	V	I	D	A	K	S	Y	K	V	V	.	.	.	.	.	.	.	K	T	F
Query Conservation									.	.	.																								.	.	.																					.	.													.	.	.	.	.	.	.
Alig confidence									.	.	.																								.	.	.																					.	.													.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	T	N	E	G	G	A	V	N	H	K	L	L	I	A	P	R	G	Q	P	S	D	W	S	H	V	L	V	D	H	S	E	D	V	F	M	E	S	I	A	V	R	S	N	Y	L	V	V	A	G	R	R	A	G	L	T	R	I	W	T	M	M	A	D	S	Q	D	G	V	F	K	A	G	T	G	L	R	E	V
Template Known Secondary structure						T	T	T		T	T								T	T	S	T	T											S	S										S	S									T	T											T	T	T	S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.							.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		D	T	P	T	H	P	N	S	L	A	L	S	A	.	.	.	.	.	.	D	G	K	T	L	Y	V	S	V	K	Q	K	S	T	K	Q	Q	E	A	T	Q	P	D	D	V	I	R	I	A	L
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.
Template Sequence		V	M	E	E	P	I	F	T	V	H	L	V	E	S	Q	M	L	E	Y	E	E	P	T	F	R	M	E	Y	S	S	L	A	T	.	.	.	.	.	.	.	P	N	T	W	F	D	V	S	P
Template Known Secondary structure						S	S							G	G	G				T	T		S									T	T		.	.	.	.	.	.	.									T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.								.	.	430	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions