Job Description P76116 Confidence 99.73% Date Wed Jan 25 15:21:05 GMT 2012 Rank 50 Aligned Residues 272 % Identity 14% Template c2qc5A_ PDB info PDB header:lyase Chain: A: PDB Molecule:streptogramin b lactonase; PDBTitle: streptogramin b lyase structure Resolution 1.80 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		G	K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	.	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D	A
Query Conservation																																																				.
Alig confidence																.								.	.	.	.	.	.																							.													.
Template Conservation																.								.	.	.	.	.	.																																				.
Template Sequence		D	S	G	P	Y	G	I	T	S	S	E	D	G	K	.	V	W	F	T	Q	H	K	.	.	.	.	.	.	A	N	K	I	S	S	L	D	Q	S	G	R	I	K	E	F	E	V	P	T	P	D	A	K	V	M	C	L	I	V	S	S	L	G	D	.	I	W	F	T	E	N	G	A	N	K	I	G	K	L	S	K
Template Known Secondary structure		T										T	T	S		.						T	T	.	.	.	.	.	.	T	T							T	T	S								S	S	T	T										T	T	S		.						T	T	T	T							T
Template Predicted Secondary structure																.								.	.	.	.	.	.																																				.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	G	F	T	E	Y	P	L	P	Q	P	D	S	.	.	.	.	.	.	.	.	.	.	.	G	P	Y	G	I	T	E	G	L	N	G	D	I	W	F	T	Q	L	N	G	D	R	I	G	K	L	T	A	D	G	T	I	Y	E	Y	D	L	P	N	K	G	S	Y	P	A	F	I	T	L	G	S	D	N	A	L
Template Known Secondary structure		T	S								S	S	T	T		.	.	.	.	.	.	.	.	.	.	.									S	T	T							T	T	T	T							T	T	S								S	S	T	T										T	T	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.												100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	P	E	S	L	A	V	L
Query Conservation
Alig confidence																											.	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		W	F	T	E	N	Q	N	N	S	I	G	R	I	T	N	T	G	K	L	E	E	Y	P	L	P	.	.	.	.	T	N	A	A	A	P	V	G	I	T	S	G	N	D	G	A	L	W	F	V	E	I	M	G	N	K	I	G	R	I	T	T	T	G	E	I	S	E	Y	D	I	P	T	P	N	A	R	P	H	A	I
Template Known Secondary structure						T	T	T	T							T	T									S	.	.	.	.	S	T	T										T	T	S	S						T	T	T	T							T	T									S	S	T	T
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	.	T	H	P	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K
Query Conservation																																					.
Alig confidence																																					.														.
Template Conservation																																																			.
Template Sequence		T	A	G	K	N	S	E	I	W	F	T	E	W	G	A	N	Q	I	G	R	I	T	N	D	N	T	I	Q	E	Y	Q	L	Q	T	E	N	A	E	P	H	G	I	T	F	G	K	D	G	S	.	V	W	F	A	L	K	C	K
Template Known Secondary structure					S	T	T							T	T	T	T							T	T	S									S	T	T										T	T	S		.						S	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions