Job Description P76116 Confidence 98.97% Date Wed Jan 25 15:21:05 GMT 2012 Rank 143 Aligned Residues 260 % Identity 14% Template c2p9wA_ PDB info PDB header:allergen Chain: A: PDB Molecule:mal s 1 allergenic protein; PDBTitle: crystal structure of the major malassezia sympodialis allergen mala s2 1 Resolution 1.35 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	D	T	I	Y	D	R	T	R	Q	V	F	Y	Q	S	N	L	Y	K	G	R	I	E	V	Y	N	P	K	T	Q	S	H	F	N	V	V	I	D	G	A	S	S	N	G	D	G	E	Q	Q	M	S	G	L	S	L	L	T	H	D	N	S	K	R	L	F	A	V	M	K	N	A	K	S	F	N	F	A	D	Q
Template Known Secondary structure			S						T	T	T	T							T	T	T	T							T	T	T									T	T	T			S	S			S									S	S	S	S	S											T	T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
							161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.														.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K
Query Conservation		.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	H	G	A	S	S	F	H	S	F	N	L	P	L	S	E	N	S	K	P	V	W	S	V	N	F	E	K	V	Q	D	E	F	E	K	K	A	G	K	R	P	F	G	V	V	Q	S	A	Q	D	R	D	G	N	S	Y	V	A	F	A	L	G	M	P	A	I	A	R	V	S	A	D	G	K	T	V	S	T	F
Template Known Secondary structure			S	S	S									S	S			T	T				S					S												S	S												T	T	S									S	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.									.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure												.	.																																					.	.	.	.	.	.	.	.
Query SS confidence												.	.																																					.	.	.	.	.	.	.	.
Query Sequence		K	L	L	D	D	G	K	E	H	F	.	.	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	.	.	.	.	.	.	.	.	V	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q
Query Conservation												.	.																																					.	.	.	.	.	.	.	.
Alig confidence												.	.											.																										.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		A	W	E	S	G	N	G	G	Q	R	P	G	Y	S	G	I	T	F	D	P	H	S	.	N	K	L	I	A	F	G	G	P	R	A	L	T	A	F	D	V	S	K	P	Y	A	W	P	E	P	V	K	I	N	G	D	F	G	T	L	S	G	T	E	K	I	V	T	V	P	V	G	N	E	S	V	L	V	G	A	R
Template Known Secondary structure								S	S	S			S		S						T	T	T	.	T						S	S	S	S	S							S	S	S	S									S	S						T	T										T	T
Template Predicted Secondary structure																								.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		293	.	.	.	.	.	.	300	.					.	.	.	.	.	.	.	.	310	.	.							.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure											.	.	.	.												.	.	.	.	.	.
Query SS confidence											.	.	.	.												.	.	.	.	.	.
Query Sequence		A	G	K	V	S	V	I	D	A	.	.	.	.	K	S	Y	K	V	V	K	T	F	D	T	.	.	.	.	.	.	P	T	H	P	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K	S	T	K	Q	Q	E	A	T	Q	P	D	D	V	I	R	I	A
Query Conservation											.	.	.	.												.	.	.	.	.	.
Alig confidence											.	.	.	.												.	.	.	.	.	.														.
Template Conservation																																													.
Template Sequence		A	P	Y	A	I	S	F	R	S	W	D	N	W	K	S	A	N	I	K	K	T	K	R	S	E	L	Q	N	S	G	F	T	A	V	A	D	Y	Y	Q	G	S	E	Q	.	G	L	Y	A	V	S	A	F	F	D	N	G	A	H	G	G	R	S	D	Y	P	L	Y	K	L	D
Template Known Secondary structure		T	T								S	S	T	T	S										G	G	G	G	S	S											T	T			.									G	G	G	T	T	T	S
Template Predicted Secondary structure																																													.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions