Job Description P76116 Confidence 99.45% Date Wed Jan 25 15:21:05 GMT 2012 Rank 99 Aligned Residues 259 % Identity 8% Template c2ojhA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1656/agr_c_3050; PDBTitle: the structure of putative tolb from agrobacterium tumefaciens Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L
Query Conservation
Alig confidence																																											.	.																													.	.	.	.	.	.	.
Template Conservation																																											.	.																													.	.	.	.	.	.	.
Template Sequence		X	R	S	S	I	E	I	F	N	I	R	T	R	K	X	R	V	V	W	Q	T	P	E	L	F	E	A	P	N	W	S	P	D	G	K	Y	L	L	L	N	S	.	.	E	G	L	L	Y	R	L	S	L	A	G	D	P	S	P	E	K	V	D	T	G	F	A	T	I	C	N	N	.	.	.	.	.	.	.	D	H
Template Known Secondary structure											T	T	T	T									S	S									T	T	S	S							.	.	T	T							S	S	S			S							T	T				B		S	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.																													.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.								.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	S	P	D	G	A	L	Y	A	I	S	D	K	V	E	F	G	K	S	A	I	Y	L	L	P	S	T	G	G	T	P	R	L	X	T	K	N	L	P	S	Y	W	H	G	W	S	P	D	G	K	S	F	T	Y	C	G	I	R	D	Q	V	F	D	I	Y	S	X	D	I	D	S	G	V	E	T	R	L	T	H
Template Known Secondary structure					T	T	S	S								T	T	T	S	S								T	T									S	S	S	S								T	T	S	S									T	T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.											.
Predicted Secondary structure																																																	.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	P	E	.	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	.	.	.	.	.	.	.	.	.	.	K
Query Conservation																																																	.																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	G	R	N	D	G	P	D	Y	S	P	D	G	R	W	I	Y	F	N	S	S	R	T	G	Q	X	Q	I	W	R	V	R	V	D	G	S	S	V	E	R	I	T	D	S	A	Y	G	D	W	F	P	H	P	S	P	S	G	D	K	V	V	F	V	S	Y	D	A	D	V	F	D	H	P	R	D	L	D	V	R
Template Known Secondary structure		S	S	S									T	T	S	S								T	T	S	S								T	T	S	S									S										T	T	S	S									T	T			S			S	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure											.	.										.
Query SS confidence											.	.										.
Query Sequence		V	S	V	I	D	A	K	S	Y	.	.	K	V	V	K	T	F	D	T	P	.	T	H	P	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q
Query Conservation											.	.										.
Alig confidence											.	.										.
Template Conservation
Template Sequence		V	Q	L	X	D	X	D	G	G	N	V	E	T	L	F	D	L	F	G	G	Q	G	T	X	N	S	P	N	W	S	P	D	G	D	E	F	A	Y	V	R	Y	F
Template Known Secondary structure							T	T	S		S										S	T	T	T	S		S			B		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions