Job Description P76116 Confidence 99.40% Date Wed Jan 25 15:21:05 GMT 2012 Rank 107 Aligned Residues 244 % Identity 10% Template c2j04B_ PDB info PDB header:transcription Chain: B: PDB Molecule:ydr362cp; PDBTitle: the tau60-tau91 subcomplex of yeast transcription factor2 iiic Resolution 3.2 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.																							.	.	.	.	.
Query SS confidence																																				.	.	.	.	.																							.	.	.	.	.
Query Sequence		L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	.	.	.	.	.	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	.	.	.	.	.	E	L	V	A	D	D	A	T	N	T	V	Y	I	S
Query Conservation																																				.	.	.	.	.																							.	.	.	.	.
Alig confidence																																				.	.	.	.	.																							.	.	.	.	.
Template Conservation
Template Sequence		N	I	E	E	N	T	D	I	G	K	D	I	Q	Y	L	A	V	A	V	S	Q	S	S	C	I	Q	I	F	K	M	N	T	S	T	L	H	C	V	K	V	Q	T	I	V	H	S	F	G	E	V	W	D	L	K	W	H	E	G	C	H	A	P	H	L	V	G	C	L	S	F	V	S	Q	E	G	T	I	N	F	L
Template Known Secondary structure								S	S		S	S																					T	T	T															S								S	S				S	S	S	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L
Query Conservation
Alig confidence																																									.																												.
Template Conservation																																									.																												.
Template Sequence		E	I	I	D	N	A	T	D	V	H	V	F	K	M	C	E	K	P	S	L	T	L	S	L	A	D	S	L	I	T	T	F	D	F	L	S	P	T	T	.	V	V	C	G	F	K	N	G	F	V	A	E	F	D	L	T	D	P	E	V	P	S	F	Y	D	Q	V	.	H	D	S	Y	I	L	S	V	S	T	A	Y
Template Known Secondary structure							S	S	S	S	S							S		S						T	T	T								S	S	S	S		.						T	T	S							T	T	B		S	S		S						.	S	S	S
Template Predicted Secondary structure																																									.																												.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.		.	.	.	.	.	.	.	470	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																										.	.	.	.																																																				.
Query SS confidence																										.	.	.	.																																																				.
Query Sequence		D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	.	.	.	.	G	N	I	L	A	K	V	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	.
Query Conservation																										.	.	.	.																																																				.
Alig confidence																										.	.	.	.																							.																													.
Template Conservation																																																				.
Template Sequence		S	D	F	E	D	T	V	V	S	T	V	A	V	D	G	Y	F	Y	I	F	N	P	K	D	I	A	T	T	K	T	T	V	S	R	F	R	G	S	N	L	V	P	V	V	Y	C	P	Q	I	Y	.	S	Y	I	Y	S	D	G	A	S	S	L	R	A	V	P	S	R	A	A	F	A	V	H	P	L	V	S	R	E
Template Known Secondary structure			T	T	S									T	T	S							G	G	G												S			S								T	T	T	T	.							S	S	S							T	T		T	T									S
Template Predicted Secondary structure																																																				.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	P	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	I	T	A	I	G	V	S	R	L	H	P	M	V	L	A	G	S	A	D	G
Template Known Secondary structure		S									S	S			B						T	T	T
Template Predicted Secondary structure
Template SS confidence
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions