Job Description P76116 Confidence 99.85% Date Wed Jan 25 15:21:05 GMT 2012 Rank 35 Aligned Residues 278 % Identity 14% Template c2iwkB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitrous oxide reductase; PDBTitle: inhibitor-bound form of nitrous oxide reductase from2 achromobacter cycloclastes at 1.7 angstrom resolution Resolution 1.7 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																			.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	.	.	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																		.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		D	G	R	Y	L	F	M	N	D	K	.	.	.	.	.	.	A	N	T	R	V	A	R	V	R	C	D	V	M	K	T	D	A	I	L	E	I	P	N	A	K	G	I	H	G	M	R	P	Q	K	W	P	R	S	N	Y	V	F	C	N	G	E	D	E	A	P	L	V	N	D	G	S	T	M	T	D	V	A	T	Y
Template Known Secondary structure											T	.	.	.	.	.	.	T	T	T							T	T	T	T									S	S			S									S	S	B		S								S		B		S	S		S	S	S	S	T	T		G	G	G
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
								116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	I	F	T	A	V	D	A	D	K	W	E	V	A	W	Q	V	K	V	S	G	N	L	D	N	.	.	.	.	.	.	.	.	.	.	C	D	A	D	Y	E	G	K	W	A	F	S	T	S	Y	N	S	E	M	G	M	T	L	E	E	M	T	K	S	E	M	D	H	V	V	V	F	N	I	A	E	I	E	K
Template Known Secondary structure		B								T	T	T	T									S	S					.	.	.	.	.	.	.	.	.	.					S	S	S	S							S		T	T			S	S					T		S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.											.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																							.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.																							.	.	.	.	.
Template Sequence		A	I	K	A	G	Q	Y	E	E	I	.	.	.	N	G	V	K	V	V	D	G	R	K	E	A	K	S	L	F	T	R	Y	I	P	I	.	.	.	.	.	A	N	N	P	H	G	C	N	M	A	P	D	R	K	H	L	C	V	A	G	K	L	S	P	T	V	T	V	L	D	V	T	K	F	D	A	L	F	Y	D
Template Known Secondary structure						T		S				.	.	.	T	T								G	G	G	T		S	S							.	.	.	.	.	S	S	S								T	T	S	S							T	T	S	S	B						G	G	G							S
Template Predicted Secondary structure												.	.	.																							.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
						261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.											.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure		.	.	.	.																																													.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence		.	.	.	.																																													.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		.	.	.	.	R	N	G	N	I	L	A	K	V	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	.	.	.	.	.	.	.	.	.	.	K	V	V	K	T	F	D	T	P	T	H	P	N	S	L	A	L	.	.	.	.	.
Query Conservation		.	.	.	.																																													.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Alig confidence		.	.	.	.																									.																				.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																														.
Template Sequence		N	A	E	P	R	S	A	V	V	A	E	P	E	L	G	L	G	P	L	H	T	A	F	D	G	R	G	N	.	A	Y	T	S	L	F	L	D	S	Q	V	V	K	W	N	I	D	E	A	I	R	A	Y	A	G	E	K	I	N	P	I	K	D	K	L	D	V	Q	Y	Q	P	G	H	L	K	T	V	M	G	E	T
Template Known Secondary structure					G	G	G	G						B			S									T	T	S		.						T	T	T	T																T													S	S								T	T	T	T	S
Template Predicted Secondary structure																														.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
			322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure		.																							.	.
Query SS confidence		.																							.	.
Query Sequence		.	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K	S	T	K	Q	Q	E	A	T	.	.	Q	P	D	D	V	I	R	I	A	L
Query Conservation		.																							.	.
Alig confidence		.																							.	.
Template Conservation
Template Sequence		L	D	A	A	N	D	W	L	V	C	L	C	K	F	S	K	D	R	F	L	N	V	G	P	L	K	P	E	N	D	Q	L	I	D	I
Template Known Secondary structure		T	T			S	S							S			G	G	G	S					S	S
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions