Job Description P76116 Confidence 96.49% Date Wed Jan 25 15:21:05 GMT 2012 Rank 171 Aligned Residues 174 % Identity 14% Template c2hz6A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:endoplasmic reticulum to nucleus signalling 1 PDBTitle: the crystal structure of human ire1-alpha luminal domain Resolution 3.10 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A
Query Conservation
Alig confidence									.																																.	.	.	.	.	.	.																								.	.	.	.
Template Conservation									.																																.	.	.	.	.	.	.																								.	.	.	.
Template Sequence		E	T	L	L	F	V	S	.	T	L	D	G	S	L	H	A	V	S	K	R	T	G	S	I	K	W	T	L	K	E	D	P	V	L	Q	V	P	P	A	.	.	.	.	.	.	.	F	L	P	D	P	N	D	G	S	L	Y	T	L	E	G	L	T	K	L	P	F	T	I	.	.	.	.	P	E	L	V	Q	A	S
Template Known Secondary structure		T	T						.		T	T	S							T	T	T												S							.	.	.	.	.	.	.					T	T	T									S				S				.	.	.	.					T	T
Template Predicted Secondary structure									.																																.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.								.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	C	R	L	Y	M	G	K	K	Q	D	I	W	Y	V	I	D	L	L	L	Y	L	G	R	T	E	Y	T	I	T	M	Y	D	T	K	T	R	E	L	R	W	N	A	T	Y	F	D	Y	A	A	S	L	P	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S																																	S	S	S	S	S													B					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	N	G	N	I	L	A	K	V	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	P	N	S	L	A	L	S	A	D	G	K	T	L	Y	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	D	Y	K	M	S	H	F	V	S	N	G	D	.	G	L	V	V	T	V	D	S	E	S	G	D	V	L	W	I	Q	N	Y	A	S	P	V	V	A	F	Y	V	W	Q	R	E	G	L	R	K	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T										T	S	.								T	T	T										S	S									T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
																					190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions