Job Description P76116 Confidence 99.26% Date Wed Jan 25 15:21:05 GMT 2012 Rank 125 Aligned Residues 273 % Identity 10% Template c2gopB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:trilobed protease; PDBTitle: the beta-propeller domain of the trilobed protease from pyrococcus2 furiosus reveals an open velcro topology Resolution 2.00 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	.	.	.	.	A	V	T	A	I	D	A
Query Conservation																																																																							.	.	.	.
Alig confidence																							.																						.	.	.	.																							.	.	.	.
Template Conservation																							.																						.	.	.	.
Template Sequence		A	Y	L	S	D	P	R	T	K	G	E	L	V	A	Y	V	L	T	K	A	D	.	N	K	Y	E	N	T	I	V	I	E	N	L	K	N	N	A	R	R	F	I	E	.	.	.	.	N	A	T	M	P	R	I	S	P	D	G	K	K	I	A	F	M	R	A	N	E	E	K	K	V	S	E	I	W	V	A	D	L
Template Known Secondary structure											T	T											.		S										T	T	T								.	.	.	.	T								T	T	S	S									T	T	T	T									T
Template Predicted Secondary structure																							.																						.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	L	S	S	K	K	I	L	E	A	.	.	.	.	.	.	.	.	.	.	.	K	N	I	R	S	L	E	W	N	E	D	S	R	K	L	L	I	V	G	F	K	D	G	E	K	T	T	F	W	I	F	D	T	E	S	E	E	V	I	E	E	F	E	K	P	R	F	S	S	G	I	W	H	R	D	K	I	V
Template Known Secondary structure		T	T										.	.	.	.	.	.	.	.	.	.	.	S									T	T	S	S																				T	T	T	T										T	T							T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.												.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.						.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	.	.	.	.	.	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	P	E
Query Conservation																																																							.	.	.	.	.
Alig confidence																															.	.																							.	.	.	.	.
Template Conservation																															.	.
Template Sequence		V	N	V	P	H	R	E	I	I	P	Q	Y	F	K	F	W	D	I	Y	I	W	E	D	G	K	E	E	K	M	.	.	F	E	K	V	S	F	Y	A	V	D	S	D	G	E	R	I	L	L	Y	G	K	P	E	K	K	Y	M	S	E	H	N	K	L	Y	I	Y	D	G	K	E	V	M	G	I	L	D	E	V	D
Template Known Secondary structure									S	S			S	S										T	T						.	.					S								S	S	S								T	T		T	T		S								S	S	S					S	S	T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	P	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K	S
Query Conservation
Alig confidence																															.									.	.
Template Conservation																															.									.	.
Template Sequence		R	G	V	G	Q	A	K	I	K	D	G	K	V	Y	F	T	L	F	E	E	G	S	V	N	L	Y	I	W	D	.	G	E	I	K	P	I	A	K	.	.	G	R	H	W	I	M	G	F	D	V	D	E	I	V	V	Y	L	K	E	T	A	T	R
Template Known Secondary structure											T	T									T	T								S	.	S	S							.	.	S	S	S								S	S	S								S	S	S
Template Predicted Secondary structure																															.									.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions