Job Description P76116 Confidence 99.55% Date Wed Jan 25 15:21:05 GMT 2012 Rank 82 Aligned Residues 282 % Identity 10% Template c2g8sB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:glucose/sorbosone dehydrogenases; PDBTitle: crystal structure of the soluble aldose sugar dehydrogenase2 (asd) from escherichia coli in the apo-form Resolution 1.50 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.												.	.	.							.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.												.	.	.							.	.	.	.
Query Sequence		K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	.	.	.	.	.	.	.	K	P	F	G	A	T	I	N	N	T	T	.	.	.	Q	T	L	W	F	G	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.												.	.	.							.	.	.	.
Alig confidence																						.	.	.	.	.	.	.																							.	.	.	.	.	.	.												.	.	.							.	.	.	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		D	H	P	W	A	L	A	F	L	P	D	N	H	G	X	L	I	T	L	R	.	.	.	.	.	.	.	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V
Template Known Secondary structure		S	S								S	T	T								T	.	.	.	.	.	.	.	T	T							T	T	T							B	S							S	T	T		S								T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
							107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																																									.	.	.
Query SS confidence		.	.	.	.	.																																																																									.	.	.
Query Sequence		.	.	.	.	.	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	.	.	.
Query Conservation		.	.	.	.	.																																																																									.	.	.
Alig confidence		.	.	.	.	.																																																																									.	.	.
Template Conservation
Template Sequence		G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	X	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T
Template Known Secondary structure			S	S	S													T	T	S	S	B											S	S			B	S	S	S										S	S	S									T	T		G	G	G	G	G		T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
																						179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	.	.	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	V	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	X	A	X	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	.	.	.	.	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G
Template Known Secondary structure		T	T	S				T	T		T	T	T	T	S	T	T			T	T							S									T	T	T	T									S	B	S									T	T		.	.	.	.	B			T	T	T	B		S	S	B		T	T	S
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence									.																																	.	.	.	.																																	.	.	.	.
Template Conservation									.																																	.	.	.	.
Template Sequence		F	K	I	P	E	A	K	.	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	X	A	F	Y	N	S	D	K	F	P	.	.	.	.	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	X	S	V	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R
Template Known Secondary structure		S			T	T			.	B	S	S		T	T	S				S				S	S													S	S	S	G	.	.	.	.	G	G	T	T							T	T	T	T									T	T									S	G	G	G
Template Predicted Secondary structure									.																																	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.					.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	H	P	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K	S	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	L	Y	V	L	T	D	E	S	S	G	E	L
Template Known Secondary structure												T	T	S								S	T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions