Job Description P76116 Confidence 99.46% Date Wed Jan 25 15:21:05 GMT 2012 Rank 94 Aligned Residues 264 % Identity 13% Template c2aq5A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:coronin-1a; PDBTitle: crystal structure of murine coronin-1 Resolution 1.75 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	.	.	.	.	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R
Query Conservation																																							.	.	.	.
Alig confidence														.	.	.	.	.																					.	.	.	.																				.																			.
Template Conservation														.	.	.	.	.																																												.																			.
Template Sequence		N	P	K	F	M	A	L	I	E	A	S	G	.	.	.	.	.	G	G	A	F	L	V	L	P	L	G	K	T	G	R	V	D	K	N	V	P	L	V	G	H	T	A	P	V	L	D	I	A	W	P	H	N	D	N	V	I	A	S	G	.	S	E	D	C	T	V	M	V	W	E	I	P	D	G	G	L	V	L	.
Template Known Secondary structure			S	S								S	S	.	.	.	.	.	S								T	T							T	T							S	S											T	T						.		T	T	S									T	T			S	S	.
Template Predicted Secondary structure														.	.	.	.	.																																												.																			.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	P	L	R	E	P	V	I	T	L	E	G	H	T	K	R	V	G	I	V	A	W	H	P	T	A	Q	N	V	L	L	S	A	G	D	N	V	I	L	V	W	D	V	G	T	G	A	A	V	L	T	L	G	P	D	V	H	P	D	T	I	Y	S	V	D	W	S	R	D	G	A	L	I	C	T	S	C	R	D	K
Template Known Secondary structure		.				S		S							S	S									S	S	B	T	T															T	T	T	T								T	T	T			S									T	T	S	S							T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																													.	.																.	.	.	.
Query SS confidence																																													.	.																.	.	.	.
Query Sequence		E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	.	.	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	.	.	.	.	I	L	A	K	V	A	A	P	E	S	L	A	V	L	F	N
Query Conservation																																													.	.																.	.	.	.
Alig confidence																											.	.																	.	.																.	.	.	.
Template Conservation																											.	.
Template Sequence		R	V	R	V	I	E	P	R	K	G	T	V	V	A	E	K	D	R	P	H	E	G	T	R	P	.	.	V	H	A	V	F	V	S	E	G	K	I	L	T	T	G	F	S	R	M	S	E	R	Q	V	A	L	W	D	T	K	H	L	E	E	P	L	S	L	Q	E	L	D	T	S	S	G	V	L	L	P	F	F	D
Template Known Secondary structure								T	T	T	T									S	S		S	S	S		.	.							S	T	T									T	T										T	T	B		S	S		S									S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	.	.	.	.	V	V	K	T	F	D	T	P	T	H	P	N	S	L	A	L	S	A	D
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.
Template Conservation
Template Sequence		P	D	T	N	I	V	Y	L	C	G	K	G	D	S	S	I	R	Y	F	E	I	T	S	E	A	P	F	L	H	Y	L	S	M	F	S	S	K	E	S	Q	R	G	M	G	Y	M	P	K
Template Known Secondary structure		T	T	T	T							T	T		S									S	S	T	T											S	S			S							G
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions