Job Description P76116 Confidence 98.58% Date Wed Jan 25 15:21:05 GMT 2012 Rank 156 Aligned Residues 264 % Identity 12% Template c1yr2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl oligopeptidase; PDBTitle: structural and mechanistic analysis of two prolyl endopeptidases: role2 of inter-domain dynamics in catalysis and specificity Resolution 1.80 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		A	V	G	K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	.	.	.	.	N	T	V	N	S	A	V
Query Conservation																																																																							.	.	.	.
Alig confidence																															.	.																																							.	.	.	.
Template Conservation																															.	.
Template Sequence		T	W	A	T	A	L	D	A	W	A	A	S	D	D	G	R	L	L	A	Y	S	V	Q	D	G	G	S	D	W	.	.	R	T	V	K	F	V	G	V	A	D	G	K	P	L	A	D	E	L	K	W	V	K	F	S	G	L	A	W	L	G	N	D	A	L	L	Y	S	R	F	A	E	P	L	N	Y	N	Q	T	V
Template Known Secondary structure		G												T	T	S	S									T	T		S		.	.								T	T	T													S						S	T	T	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.																		.	.	.
Query SS confidence																																																.	.	.																		.	.	.
Query Sequence		T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	.	.	.	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	.	.	.	K	T	A	I	Q	N	T	G	K	M	S
Query Conservation																																																.	.	.																		.	.	.
Alig confidence																													.	.	.	.	.															.	.	.																		.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		W	L	H	R	L	G	T	P	Q	S	A	D	Q	P	V	F	A	T	P	E	L	P	K	R	G	H	G	.	.	.	.	.	A	S	V	S	S	D	G	R	W	V	V	I	T	S	S	E	G	T	D	P	V	N	T	V	H	V	A	R	V	T	N	G	K	I	G	P	V	T	A	L	I	P	D	L	K	A	Q	W
Template Known Secondary structure						T	T	S		G	G	G								T	T		T	T					.	.	.	.	.					T	T	S										T	T		S											T	T											S	S	S	S
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	V	D	G	V	G	D	Q	L	W	F	V	S	G	D	G	A	P	L	K	K	I	V	R	V	D	L	S	G	S	T	P	R	F	D	T	V	V	P	E	S	K	D	N	L	E	S	V	G	I	A	G	N	R	L	F	A	S	Y	I	H	D	A	K	S	Q	V	L	A	F	D	L	D	G	K	P	A	G	A
Template Known Secondary structure								T	T								T	T		T	T									S	S	S	S											S	S									B	T									T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		268	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																									.	.	.
Query SS confidence				.	.																									.	.	.
Query Sequence		K	V	.	.	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	.	.	.	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K
Query Conservation				.	.																									.	.	.
Alig confidence				.	.																									.	.	.
Template Conservation
Template Sequence		V	S	L	P	G	I	G	S	A	S	G	L	S	G	R	P	G	D	R	H	A	Y	L	S	F	S	S	F	T	Q	P	A	T	V	L	A	L	D	P	A	T	A	K	T	T	P
Template Known Secondary structure			B		S	S	S										B	T		S									T	T										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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