Job Description P76116 Confidence 99.46% Date Wed Jan 25 15:21:05 GMT 2012 Rank 97 Aligned Residues 301 % Identity 8% Template c1vyhT_ PDB info PDB header:hydrolase Chain: T: PDB Molecule:platelet-activating factor acetylhydrolase ib PDBTitle: paf-ah holoenzyme: lis1/alfa2 Resolution 3.4 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	T	Q	A	A	E	E	M	L	R	K	A	V	G	K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.
Template Sequence		W	I	P	R	P	P	E	K	Y	A	L	S	G	H	R	S	P	V	T	R	V	I	F	H	P	V	F	S	V	M	V	S	A	S	E	.	.	.	.	.	.	.	D	A	T	I	K	V	W	D	Y	E	T	G	D	F	E	R	T	L	K	G	H	T	D	S	V	Q	D	I	S	F	D	H	S	G	K	L	L	A
Template Known Secondary structure						S	S		S							S	S									S	S	S	S							S	.	.	.	.	.	.	.	S	S							T	T	T											S	S									T	T	S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	C	S	A	D	M	T	I	K	L	W	D	F	Q	G	F	E	C	I	R	T	M	H	G	H	D	H	N	V	S	S	V	S	I	M	P	N	G	D	H	I	V	S	A	S	R	D	K	T	I	K	M	W	E	V	Q	T	G	Y	C	V	K	T	F	T	G	H	R	E	W	V	R	M	V	R	P	N	Q	D	G
Template Known Secondary structure					T	T	S							T	T	S	S										S	S									S	S	S	S							T	T	T							T	T	T											S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		T	L	I	A	S	C	S	N	D	Q	T	V	R	V	W	V	V	A	T	K	E	C	K	A	E	L	R	E	H	R	H	V	V	.	.	E	C	I	S	W	A	P	E	S	S	Y	S	S	I	S	E	A	T	G	S	E	G	P	F	L	L	S	G	S	R	D	K	T	I	K	M	W	D	V	S	T	G	M	C	L
Template Known Secondary structure		S							T	T	S							T	T	T											S	S		B	.	.					B			S		G	G	G	G	G	G	G			S										B	S	S	S							T	T	T	T
Template Predicted Secondary structure																																			.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		L	A	K	V	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	P	.	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K
Query Conservation																																																					.
Alig confidence																																																					.
Template Conservation
Template Sequence		M	T	L	V	G	H	D	N	W	V	R	G	V	L	F	H	S	G	G	K	F	I	L	S	C	A	D	D	K	T	L	R	V	W	D	Y	K	N	K	R	C	M	K	T	L	N	A	H	E	H	F	V	T	S	L	D	F	H	K	T	A	P	Y	V	V	T	G	S	V	D	Q
Template Known Secondary structure								S	S									S	S	S	S							S	S	S								S	T	T										S	S									S	S	S	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions