Job Description P76116 Confidence 99.97% Date Wed Jan 25 15:21:05 GMT 2012 Rank 10 Aligned Residues 287 % Identity 15% Template c1qniE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:nitrous-oxide reductase; PDBTitle: crystal structure of nitrous oxide reductase from2 pseudomonas nautica, at 2.4a resolution Resolution 2.40 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																													.	.																												.	.	.	.	.	.	.	.
Query SS confidence																																													.	.																												.	.	.	.	.	.	.	.
Query Sequence		K	G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	.	.	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	.	.	.	.	.	.	.	.
Query Conservation																																													.	.																												.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.																	.	.																												.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		P	H	I	S	M	T	D	G	R	Y	D	G	K	Y	L	F	I	N	D	K	A	.	.	.	.	.	.	N	T	R	V	A	R	I	R	L	D	I	M	K	T	D	K	I	T	H	I	P	N	V	Q	A	I	H	G	L	R	L	Q	K	V	P	K	T	N	Y	V	F	C	N	A	E	F	V	I	P	Q	P	N	D
Template Known Secondary structure								T	T												T	T	.	.	.	.	.	.	T	T							T	T	T	T									T	T												S	S	B										S				S	S		S
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
												111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	D	F	S	L	D	N	S	Y	T	M	F	T	A	I	D	A	E	T	M	D	V	A	W	Q	V	I	V	D	G	N	L	D	N	T	D	A	D	Y	T	G	K	Y	A	T	S	T	C	Y	N	S	E	R	A	V	D	L	A	G	T	M	R	N	D	R	D	W	V	V	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S				G	G	G										T	T	T										S	S									S	S	S	S							S		T	T			S	S					T		S	S						.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	.	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D
Query Conservation																																							.
Alig confidence		.	.																				.	.															.								.	.	.	.	.
Template Conservation		.	.																				.	.																							.	.	.	.	.
Template Sequence		.	.	V	F	N	V	E	R	I	A	A	A	V	K	A	G	N	F	K	T	I	.	.	G	D	S	K	V	P	V	V	D	G	R	G	E	S	E	F	T	R	Y	I	P	V	.	.	.	.	.	P	K	N	P	H	G	L	N	T	S	P	D	G	K	Y	F	I	A	N	G	K	L	S	P	T	V	S	V	I	A
Template Known Secondary structure		.	.													T	T			B			.	.	T	T									S	S	S		S	S							.	.	.	.	.		S	S								T	T	S								T	T	S	S	B
Template Predicted Secondary structure		.	.																				.	.																							.	.	.	.	.
Template SS confidence
				225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		260	.	.														.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.											.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	I	L	A	K	V	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	.	.	.	.	.	.	.	.	.	.	K	V	V	K	T	F	D	T	P	T	H	P
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																							.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.
Template Sequence		I	D	K	L	D	D	L	F	E	D	K	I	E	L	R	D	T	I	V	A	E	P	E	L	G	L	G	P	L	H	T	T	F	D	G	R	G	N	.	A	Y	T	T	L	F	I	D	S	Q	V	C	K	W	N	I	A	D	A	I	K	H	Y	N	G	D	R	V	N	Y	I	R	Q	K	L	D	V	Q	Y	Q	P
Template Known Secondary structure		G	G	G					T	T	T	S	S		G	G	G	G						B			S									S	S	S		.						T	T	T	T																T													S	S
Template Predicted Secondary structure																																								.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		317							.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure			.	.	.	.	.	.																.	.
Query SS confidence			.	.	.	.	.	.																.	.
Query Sequence		N	.	.	.	.	.	.	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	.	.	K	Q	K	S	T	K	Q	Q	E	A	T	Q	P	D	D	V	I	R	I	A	L
Query Conservation			.	.	.	.	.	.																.	.
Alig confidence			.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		G	H	N	H	A	S	L	T	E	S	R	D	A	D	G	K	W	L	V	V	L	S	K	F	S	K	D	R	F	L	P	V	G	P	L	H	P	E	N	D	Q	L	I	D	I
Template Known Secondary structure							T	T	T	T	S	T	T											S			T	T	S	S				S	S	S
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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