Job Description P76116 Confidence 98.34% Date Wed Jan 25 15:21:05 GMT 2012 Rank 159 Aligned Residues 260 % Identity 16% Template c1p22A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:f-box/wd-repeat protein 1a; PDBTitle: structure of a beta-trcp1-skp1-beta-catenin complex:2 destruction motif binding and lysine specificity on the3 scfbeta-trcp1 ubiquitin ligase Resolution 2.95 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D	A	K	T	G	E	V	K	G	R
Query Conservation
Alig confidence																.	.	.	.	.	.	.																										.														.
Template Conservation																.	.	.	.	.	.	.																										.														.
Template Sequence		C	L	Q	Y	D	D	Q	K	I	V	S	G	L	R	.	.	.	.	.	.	.	D	N	T	I	K	I	W	D	K	N	T	L	E	C	K	R	I	L	T	G	H	T	G	S	V	.	L	C	L	Q	Y	D	E	R	V	I	I	T	G	.	S	S	D	S	T	V	R	V	W	D	V	N	T	G	E	M	L	N	T
Template Known Secondary structure							S	S							S	.	.	.	.	.	.	.	S	S							S	S	S											S	S			.							S	S						.		T	T	S							S	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.																										.														.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.								.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	L	Y	T	T	N	A	D	G
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	H	H	C	E	.	.	.	.	.	.	.	.	.	.	.	.	A	V	L	H	L	R	F	N	N	G	M	M	V	T	C	S	K	D	R	S	I	A	V	W	D	M	A	S	P	T	D	I	T	L	R	R	V	L	V	G	H	R	A	A	V	N	V	V	D	F	D	D	K	Y	I	V	S	A	S	G	D	R
Template Known Secondary structure							S	.	.	.	.	.	.	.	.	.	.	.	.									T	T							T	T	S								S	S	S	S												S	S									T	T							T	T	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		343	.	.	.	.	.													.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A
Query Conservation
Alig confidence																															.	.	.	.	.	.	.																																											.
Template Conservation																															.	.	.	.	.	.	.																																											.
Template Sequence		T	I	K	V	W	N	T	S	T	C	E	F	V	R	T	L	N	G	H	K	R	G	I	A	C	L	Q	Y	R	.	.	.	.	.	.	.	D	R	L	V	V	S	G	S	S	D	N	T	I	R	L	W	D	I	E	C	G	A	C	L	R	V	L	E	G	H	E	E	L	V	R	C	I	R	F	D	N	K	.	R
Template Known Secondary structure								T	T	T											S	S									.	.	.	.	.	.	.	T	T							T	T	S							T	T	T											S	S									S	S	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.																																											.
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.								440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.		.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.										.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.												.
Query SS confidence																					.	.	.	.	.	.	.	.	.												.
Query Sequence		Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	.	.	.	.	.	.	.	.	.	V	V	K	T	F	D	T	P	T	H	P	.	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K	S	T	K
Query Conservation																					.	.	.	.	.	.	.	.	.												.
Alig confidence																					.	.	.	.	.	.	.	.	.												.						.	.						.
Template Conservation																																															.	.						.
Template Sequence		I	V	S	G	A	Y	D	G	K	I	K	V	W	D	L	V	A	A	L	D	P	R	A	P	A	G	T	L	C	L	R	T	L	V	E	H	S	G	R	V	F	R	L	Q	F	.	.	D	E	F	Q	I	.	V	S	S	S	H	D	D	T	I
Template Known Secondary structure							T	T	S											T	S	T	T	S		T	T	T	T									S	S								.	.		S	S			.					S	S	S
Template Predicted Secondary structure																																															.	.						.
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.			.	.	530	.	.		.	.	.	.	.	.	.	540	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions