Job Description P76116 Confidence 25.12% Date Wed Jan 25 15:21:05 GMT 2012 Rank 193 Aligned Residues 40 % Identity 13% Template c1olzB_ PDB info PDB header:developmental protein Chain: B: PDB Molecule:semaphorin 4d; PDBTitle: the ligand-binding face of the semaphorins revealed by the2 high resolution crystal structure of sema4d Resolution 2.0 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	D	L	K	P
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		S	A	L	L	L	S	E	D	K	D	T	L	Y	I	G	A	R	.	.	.	.	.	.	.	.	E	A	V	F	A	V	N	A	L	N	I	S	E	K	Q	H	E	V	Y	W	K	V	S
Template Known Secondary structure								S	S	S	S							B	.	.	.	.	.	.	.	.	T							T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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