Job Description P76116 Confidence 99.66% Date Wed Jan 25 15:21:05 GMT 2012 Rank 61 Aligned Residues 272 % Identity 12% Template c1nr0A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:actin interacting protein 1; PDBTitle: two seven-bladed beta-propeller domains revealed by the2 structure of a c. elegans homologue of yeast actin3 interacting protein 1 (aip1). Resolution 1.70 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		G	A	Y	E	M	A	Y	S	Q	Q	E	N	A	L	W	L	A	T	S	Q	S	R	K	L	D	K	G	G	V	V	Y	R	L	D	P	V	T	L	E	V	T	Q	A	I	H	N	.	D	L	K	P	F	G	A	T	I	N	N	T	T	Q	T	L	W	F	G	N	T	V	N	S	A	V	T	A	I	D	A	K	T
Query Conservation																																																.
Alig confidence																				.	.	.	.	.	.	.	.																					.																				.
Template Conservation																				.	.	.	.	.	.	.	.																																									.
Template Sequence		T	A	V	V	L	G	N	T	P	A	G	D	K	I	Q	Y	C	N	.	.	.	.	.	.	.	.	G	T	S	V	Y	T	V	P	V	G	S	L	T	D	T	E	I	Y	T	E	H	S	H	Q	T	T	V	A	K	T	S	P	S	G	Y	Y	C	A	S	G	.	D	V	H	G	N	V	R	I	W	D	T	T	Q
Template Known Secondary structure										T	T	S	S							.	.	.	.	.	.	.	.	T	T							T	T		S	S									S	S									T	T	S	S						.		T	T	S							S	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																																									.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		G	E	V	K	G	R	L	V	L	D	D	R	K	R	T	E	E	V	R	P	L	Q	P	R	E	L	V	A	D	D	A	T	N	T	V	Y	I	S	G	I	G	K	E	S	V	I	W	V	V	D	G	G	N	I	K	L	K	T	A	I	Q	N	T	G	K	M	S	T	G	L	A	L	D	S	E	G	K	R	.	L
Query Conservation																																																																																.
Alig confidence																			.	.	.	.	.	.	.																																																							.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		T	T	H	I	L	K	T	T	I	P	V	F	S	G	P	V	K	.	.	.	.	.	.	.	D	I	S	W	D	S	E	S	K	R	I	A	A	V	G	E	G	R	E	R	F	G	H	V	F	L	F	D	T	G	T	S	N	G	N	L	T	G	Q	A	R	A	M	N	S	V	D	F	K	P	S	R	P	F	R	I
Template Known Secondary structure		T	T										S	S	S				.	.	.	.	.	.	.						T	T	S										S	S		S						T	T	T			B		B						S	S									S	S	S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		Y	T	T	N	A	D	G	E	L	I	T	I	D	T	A	D	N	K	I	L	S	R	K	K	L	L	D	D	G	K	E	H	F	F	I	N	I	S	L	D	T	A	R	Q	R	A	F	I	T	D	S	K	A	A	E	V	L	V	V	D	T	R	N	G	N	I	L	A	K	V	A	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.																	.																											.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.																	.
Template Sequence		I	S	G	S	D	D	N	T	V	A	I	F	E	G	P	P	F	K	F	K	S	T	F	G	.	.	.	.	E	H	T	K	F	V	H	S	V	R	Y	N	P	D	G	S	.	L	F	A	S	T	G	G	D	G	T	I	V	L	Y	N	G	V	D	G	T	K	T	G	V	F	E	D	D	S	L	K	N	V	A	H
Template Known Secondary structure						T	T	S							T	T	T	B								.	.	.	.			S	S									T	T	S	S	.							T	T	S							T	T	T								B		T	T	S	S	S		S	S
Template Predicted Secondary structure																										.	.	.	.																	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		A	P	E	S	L	A	V	L	F	N	P	A	R	N	E	A	Y	V	T	H	R	Q	A	G	K	V	S	V	I	D	A	K	S	Y	K	V	V	K	T	F	D	T	P	T	H	P	.	.	N	S	L	A	L	S	A	D	G	K	T	L	Y	V	S	V	K	Q	K
Query Conservation																																																.	.
Alig confidence																					.																											.	.
Template Conservation																					.
Template Sequence		S	G	S	V	F	G	L	T	W	S	P	D	G	T	K	I	A	S	A	.	S	A	D	K	T	I	K	I	W	N	V	A	T	L	K	V	E	K	T	I	P	V	G	T	R	I	E	D	Q	Q	L	G	I	I	W	T	K	Q	A	L	V	S	I	S	A	N	G
Template Known Secondary structure		S	S									T	T	S	S						.		T	T	S							T	T	T	T										S	S	G	G	G									S	S							T	T
Template Predicted Secondary structure																					.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions