Return to main results Retrieve Phyre Job Id

Job DescriptionP61175
Confidence2.67%DateThu Jan 5 12:07:19 GMT 2012
Rank78Aligned Residues40
% Identity15%Templated2esna1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LysR-like transcriptional regulators
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50
Predicted Secondary structure 








Query SS confidence 







































Query Sequence  RSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKV
Query Conservation 
 



   
   


  
  
   
   


 
  
 
 
Alig confidence 







































Template Conservation   
 
  
  
  
    
 
 

  
 


 


  
  
Template Sequence  RLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRL
Template Known Secondary structure  TS
TTSST

Template Predicted Secondary structure 







Template SS confidence 







































   7..10.........20.........30.........40......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions